Experiment: 2-Deoxyadenosine 4 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18450 and BWI76_RS18455 are separated by 446 nucleotides BWI76_RS18455 and BWI76_RS18460 are separated by 93 nucleotides BWI76_RS18460 and BWI76_RS18465 are separated by 100 nucleotides
BWI76_RS18450: BWI76_RS18450 - hypothetical protein, at 3,827,829 to 3,829,286
_RS18450
BWI76_RS18455: BWI76_RS18455 - tRNA-Ser, at 3,829,733 to 3,829,822
_RS18455
BWI76_RS18460: BWI76_RS18460 - DgsA anti-repressor MtfA, at 3,829,916 to 3,830,713
_RS18460
BWI76_RS18465: BWI76_RS18465 - tRNA-Asn, at 3,830,814 to 3,830,889
_RS18465
Position (kb)
3829
3830 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 3828.955 kb on - strand, within BWI76_RS18450 at 3828.978 kb on + strand, within BWI76_RS18450 at 3828.986 kb on - strand, within BWI76_RS18450 at 3829.002 kb on + strand, within BWI76_RS18450 at 3829.006 kb on + strand, within BWI76_RS18450 at 3829.006 kb on + strand at 3829.006 kb on + strand, within BWI76_RS18450 at 3829.014 kb on - strand, within BWI76_RS18450 at 3829.014 kb on - strand, within BWI76_RS18450 at 3829.071 kb on + strand, within BWI76_RS18450 at 3829.124 kb on + strand, within BWI76_RS18450 at 3829.124 kb on + strand, within BWI76_RS18450 at 3829.124 kb on + strand, within BWI76_RS18450 at 3829.124 kb on + strand, within BWI76_RS18450 at 3829.134 kb on + strand, within BWI76_RS18450 at 3829.139 kb on + strand, within BWI76_RS18450 at 3829.142 kb on - strand at 3829.142 kb on - strand at 3829.142 kb on - strand at 3829.142 kb on - strand at 3829.149 kb on + strand at 3829.176 kb on + strand at 3829.210 kb on + strand at 3829.214 kb on + strand at 3829.215 kb on - strand at 3829.220 kb on + strand at 3829.222 kb on + strand at 3829.225 kb on + strand at 3829.228 kb on - strand at 3829.228 kb on - strand at 3829.233 kb on - strand at 3829.257 kb on + strand at 3829.257 kb on + strand at 3829.257 kb on + strand at 3829.257 kb on + strand at 3829.257 kb on + strand at 3829.257 kb on + strand at 3829.257 kb on + strand at 3829.257 kb on + strand at 3829.257 kb on + strand at 3829.257 kb on + strand at 3829.257 kb on + strand at 3829.257 kb on + strand at 3829.257 kb on + strand at 3829.257 kb on + strand at 3829.257 kb on + strand at 3829.257 kb on + strand at 3829.259 kb on + strand at 3829.265 kb on - strand at 3829.265 kb on - strand at 3829.265 kb on - strand at 3829.265 kb on - strand at 3829.265 kb on - strand at 3829.265 kb on - strand at 3829.265 kb on - strand at 3829.265 kb on - strand at 3829.265 kb on - strand at 3829.265 kb on - strand at 3829.265 kb on - strand at 3829.270 kb on + strand at 3829.314 kb on + strand at 3829.315 kb on + strand at 3829.320 kb on - strand at 3829.325 kb on + strand at 3829.333 kb on - strand at 3829.333 kb on - strand at 3829.333 kb on - strand at 3829.348 kb on - strand at 3829.371 kb on + strand at 3829.373 kb on - strand at 3829.373 kb on - strand at 3829.391 kb on - strand at 3829.398 kb on + strand at 3829.417 kb on - strand at 3829.438 kb on - strand at 3829.478 kb on - strand at 3829.525 kb on - strand at 3829.537 kb on - strand at 3829.541 kb on + strand at 3829.553 kb on + strand at 3829.554 kb on - strand at 3829.561 kb on + strand at 3829.610 kb on - strand at 3829.677 kb on + strand at 3829.677 kb on + strand at 3829.765 kb on + strand, within BWI76_RS18455 at 3829.836 kb on + strand at 3829.892 kb on + strand at 3829.900 kb on - strand at 3829.934 kb on - strand at 3830.033 kb on + strand, within BWI76_RS18460 at 3830.091 kb on + strand, within BWI76_RS18460 at 3830.099 kb on + strand, within BWI76_RS18460 at 3830.188 kb on + strand, within BWI76_RS18460 at 3830.188 kb on + strand, within BWI76_RS18460 at 3830.278 kb on - strand, within BWI76_RS18460 at 3830.315 kb on + strand, within BWI76_RS18460 at 3830.425 kb on + strand, within BWI76_RS18460
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C) remove 3,828,955 - BWI76_RS18450 0.77 -2.0 3,828,978 + BWI76_RS18450 0.79 +1.0 3,828,986 - BWI76_RS18450 0.79 -0.2 3,829,002 + BWI76_RS18450 0.80 -3.0 3,829,006 + BWI76_RS18450 0.81 -2.9 3,829,006 + +4.5 3,829,006 + BWI76_RS18450 0.81 +0.1 3,829,014 - BWI76_RS18450 0.81 +2.4 3,829,014 - BWI76_RS18450 0.81 -0.5 3,829,071 + BWI76_RS18450 0.85 +0.7 3,829,124 + BWI76_RS18450 0.89 -1.4 3,829,124 + BWI76_RS18450 0.89 +2.0 3,829,124 + BWI76_RS18450 0.89 -0.2 3,829,124 + BWI76_RS18450 0.89 +1.1 3,829,134 + BWI76_RS18450 0.90 +0.9 3,829,139 + BWI76_RS18450 0.90 -0.7 3,829,142 - +0.2 3,829,142 - -1.2 3,829,142 - -2.3 3,829,142 - +0.2 3,829,149 + +1.0 3,829,176 + +0.7 3,829,210 + -0.0 3,829,214 + -0.7 3,829,215 - -2.0 3,829,220 + +0.3 3,829,222 + +0.5 3,829,225 + -1.4 3,829,228 - +0.0 3,829,228 - -1.3 3,829,233 - +0.5 3,829,257 + +0.6 3,829,257 + +1.7 3,829,257 + +1.0 3,829,257 + +2.0 3,829,257 + +0.4 3,829,257 + -0.7 3,829,257 + -0.3 3,829,257 + -1.3 3,829,257 + +2.6 3,829,257 + +0.5 3,829,257 + -0.0 3,829,257 + -2.1 3,829,257 + +0.2 3,829,257 + -0.0 3,829,257 + +0.0 3,829,257 + +1.0 3,829,259 + -1.3 3,829,265 - +1.0 3,829,265 - -0.4 3,829,265 - +1.2 3,829,265 - +0.3 3,829,265 - +0.6 3,829,265 - -0.5 3,829,265 - -0.1 3,829,265 - +0.0 3,829,265 - +0.0 3,829,265 - +0.0 3,829,265 - +0.9 3,829,270 + +0.4 3,829,314 + +0.8 3,829,315 + +1.7 3,829,320 - +0.8 3,829,325 + +0.8 3,829,333 - +0.6 3,829,333 - +1.5 3,829,333 - -1.6 3,829,348 - +0.6 3,829,371 + +0.4 3,829,373 - -1.5 3,829,373 - -1.0 3,829,391 - +0.5 3,829,398 + +0.4 3,829,417 - -0.2 3,829,438 - +0.0 3,829,478 - +0.2 3,829,525 - +1.4 3,829,537 - -0.5 3,829,541 + -0.8 3,829,553 + +0.2 3,829,554 - -0.3 3,829,561 + +0.5 3,829,610 - +0.6 3,829,677 + +0.8 3,829,677 + -1.1 3,829,765 + BWI76_RS18455 0.36 -1.3 3,829,836 + +3.0 3,829,892 + +0.0 3,829,900 - +0.9 3,829,934 - -0.1 3,830,033 + BWI76_RS18460 0.15 -1.1 3,830,091 + BWI76_RS18460 0.22 -1.4 3,830,099 + BWI76_RS18460 0.23 +0.2 3,830,188 + BWI76_RS18460 0.34 +1.3 3,830,188 + BWI76_RS18460 0.34 -2.2 3,830,278 - BWI76_RS18460 0.45 -1.3 3,830,315 + BWI76_RS18460 0.50 +0.6 3,830,425 + BWI76_RS18460 0.64 -0.1
Or see this region's nucleotide sequence