Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS17290

Experiment: 2-Deoxyadenosine 4 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS17280 and BWI76_RS17285 are separated by 112 nucleotidesBWI76_RS17285 and BWI76_RS17290 are separated by 42 nucleotidesBWI76_RS17290 and BWI76_RS17295 are separated by 159 nucleotidesBWI76_RS17295 and BWI76_RS17300 are separated by 35 nucleotidesBWI76_RS17300 and BWI76_RS17310 are separated by 282 nucleotides BWI76_RS17280: BWI76_RS17280 - patatin family protein, at 3,580,947 to 3,581,846 _RS17280 BWI76_RS17285: BWI76_RS17285 - hypothetical protein, at 3,581,959 to 3,582,417 _RS17285 BWI76_RS17290: BWI76_RS17290 - formyltetrahydrofolate deformylase, at 3,582,460 to 3,583,302 _RS17290 BWI76_RS17295: BWI76_RS17295 - tRNA-Tyr, at 3,583,462 to 3,583,546 _RS17295 BWI76_RS17300: BWI76_RS17300 - tRNA-Tyr, at 3,583,582 to 3,583,666 _RS17300 BWI76_RS17310: BWI76_RS17310 - AsnC family transcriptional regulator, at 3,583,949 to 3,584,392 _RS17310 Position (kb) 3582 3583 3584Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 3581.581 kb on - strand, within BWI76_RS17280at 3581.997 kb on - strandat 3582.047 kb on + strand, within BWI76_RS17285at 3582.105 kb on + strand, within BWI76_RS17285at 3582.151 kb on + strand, within BWI76_RS17285at 3582.182 kb on + strand, within BWI76_RS17285at 3582.221 kb on + strand, within BWI76_RS17285at 3582.270 kb on - strand, within BWI76_RS17285at 3582.321 kb on + strand, within BWI76_RS17285at 3582.321 kb on + strand, within BWI76_RS17285at 3582.482 kb on - strandat 3582.500 kb on - strandat 3582.663 kb on - strand, within BWI76_RS17290at 3582.663 kb on - strandat 3582.706 kb on - strand, within BWI76_RS17290at 3582.763 kb on - strand, within BWI76_RS17290at 3583.036 kb on - strand, within BWI76_RS17290at 3583.176 kb on + strand, within BWI76_RS17290at 3583.443 kb on + strandat 3583.607 kb on - strand, within BWI76_RS17300at 3583.622 kb on - strand, within BWI76_RS17300at 3583.819 kb on + strandat 3583.905 kb on + strandat 3583.967 kb on + strandat 3584.037 kb on + strand, within BWI76_RS17310at 3584.196 kb on + strand, within BWI76_RS17310at 3584.209 kb on - strand, within BWI76_RS17310at 3584.262 kb on - strand, within BWI76_RS17310at 3584.262 kb on - strand, within BWI76_RS17310

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C)
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3,581,581 - BWI76_RS17280 0.70 +0.5
3,581,997 - -1.1
3,582,047 + BWI76_RS17285 0.19 +0.5
3,582,105 + BWI76_RS17285 0.32 +1.1
3,582,151 + BWI76_RS17285 0.42 +0.7
3,582,182 + BWI76_RS17285 0.49 -3.0
3,582,221 + BWI76_RS17285 0.57 +0.4
3,582,270 - BWI76_RS17285 0.68 -0.3
3,582,321 + BWI76_RS17285 0.79 -0.1
3,582,321 + BWI76_RS17285 0.79 +1.1
3,582,482 - -4.9
3,582,500 - -2.6
3,582,663 - BWI76_RS17290 0.24 -1.1
3,582,663 - -1.7
3,582,706 - BWI76_RS17290 0.29 -3.6
3,582,763 - BWI76_RS17290 0.36 -1.9
3,583,036 - BWI76_RS17290 0.68 -1.5
3,583,176 + BWI76_RS17290 0.85 -5.1
3,583,443 + -1.2
3,583,607 - BWI76_RS17300 0.29 -1.1
3,583,622 - BWI76_RS17300 0.47 -0.0
3,583,819 + -0.2
3,583,905 + -0.8
3,583,967 + +0.9
3,584,037 + BWI76_RS17310 0.20 +0.1
3,584,196 + BWI76_RS17310 0.56 +0.9
3,584,209 - BWI76_RS17310 0.59 +0.3
3,584,262 - BWI76_RS17310 0.70 +0.6
3,584,262 - BWI76_RS17310 0.70 -2.0

Or see this region's nucleotide sequence