Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS17225

Experiment: 2-Deoxyadenosine 4 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS17220 and BWI76_RS17225 overlap by 4 nucleotidesBWI76_RS17225 and BWI76_RS17230 are separated by 11 nucleotidesBWI76_RS17230 and BWI76_RS17235 are separated by 14 nucleotides BWI76_RS17220: BWI76_RS17220 - oligopeptide ABC transporter ATP-binding protein OppF, at 3,566,713 to 3,567,717 _RS17220 BWI76_RS17225: BWI76_RS17225 - oligopeptide ABC transporter ATP-binding protein OppD, at 3,567,714 to 3,568,727 _RS17225 BWI76_RS17230: BWI76_RS17230 - peptide ABC transporter permease, at 3,568,739 to 3,569,647 _RS17230 BWI76_RS17235: BWI76_RS17235 - peptide ABC transporter permease, at 3,569,662 to 3,570,582 _RS17235 Position (kb) 3567 3568 3569Strain fitness (log2 ratio) -1 0 1 2at 3566.719 kb on - strandat 3566.923 kb on + strand, within BWI76_RS17220at 3566.924 kb on - strand, within BWI76_RS17220at 3566.943 kb on - strand, within BWI76_RS17220at 3567.198 kb on - strand, within BWI76_RS17220at 3567.491 kb on + strand, within BWI76_RS17220at 3567.585 kb on + strand, within BWI76_RS17220at 3567.778 kb on - strandat 3567.874 kb on + strand, within BWI76_RS17225at 3567.916 kb on + strand, within BWI76_RS17225at 3567.924 kb on - strand, within BWI76_RS17225at 3568.018 kb on - strand, within BWI76_RS17225at 3568.138 kb on + strand, within BWI76_RS17225at 3568.322 kb on - strand, within BWI76_RS17225at 3568.341 kb on - strand, within BWI76_RS17225at 3568.428 kb on - strand, within BWI76_RS17225at 3568.453 kb on - strand, within BWI76_RS17225at 3568.745 kb on - strandat 3568.882 kb on + strand, within BWI76_RS17230at 3569.244 kb on - strand, within BWI76_RS17230at 3569.287 kb on - strand, within BWI76_RS17230at 3569.301 kb on + strand, within BWI76_RS17230

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C)
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3,566,719 - -0.0
3,566,923 + BWI76_RS17220 0.21 -0.0
3,566,924 - BWI76_RS17220 0.21 -0.1
3,566,943 - BWI76_RS17220 0.23 +0.7
3,567,198 - BWI76_RS17220 0.48 -0.4
3,567,491 + BWI76_RS17220 0.77 -0.8
3,567,585 + BWI76_RS17220 0.87 +0.7
3,567,778 - -0.2
3,567,874 + BWI76_RS17225 0.16 +0.7
3,567,916 + BWI76_RS17225 0.20 +0.2
3,567,924 - BWI76_RS17225 0.21 +0.2
3,568,018 - BWI76_RS17225 0.30 +1.0
3,568,138 + BWI76_RS17225 0.42 +0.2
3,568,322 - BWI76_RS17225 0.60 +0.6
3,568,341 - BWI76_RS17225 0.62 +1.3
3,568,428 - BWI76_RS17225 0.70 +1.4
3,568,453 - BWI76_RS17225 0.73 +0.9
3,568,745 - +0.3
3,568,882 + BWI76_RS17230 0.16 +0.2
3,569,244 - BWI76_RS17230 0.56 -0.7
3,569,287 - BWI76_RS17230 0.60 +0.6
3,569,301 + BWI76_RS17230 0.62 +1.9

Or see this region's nucleotide sequence