Experiment: 2-Deoxyadenosine 4 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS17180 and BWI76_RS17185 are separated by 106 nucleotides BWI76_RS17185 and BWI76_RS17190 are separated by 19 nucleotides BWI76_RS17190 and BWI76_RS17195 are separated by 211 nucleotides BWI76_RS17195 and BWI76_RS17200 are separated by 58 nucleotides BWI76_RS17200 and BWI76_RS17205 are separated by 32 nucleotides
BWI76_RS17180: BWI76_RS17180 - hypothetical protein, at 3,561,034 to 3,561,318
_RS17180
BWI76_RS17185: BWI76_RS17185 - fructosamine kinase family protein, at 3,561,425 to 3,562,297
_RS17185
BWI76_RS17190: BWI76_RS17190 - TonB system transport protein TonB, at 3,562,317 to 3,563,054
_RS17190
BWI76_RS17195: BWI76_RS17195 - hypothetical protein, at 3,563,266 to 3,563,562
_RS17195
BWI76_RS17200: BWI76_RS17200 - hypothetical protein, at 3,563,621 to 3,563,905
_RS17200
BWI76_RS17205: BWI76_RS17205 - cardiolipin synthase A, at 3,563,938 to 3,565,398
_RS17205
Position (kb)
3562
3563
3564 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3561.767 kb on + strand, within BWI76_RS17185 at 3562.198 kb on + strand, within BWI76_RS17185 at 3562.548 kb on + strand, within BWI76_RS17190 at 3562.960 kb on - strand, within BWI76_RS17190 at 3562.965 kb on - strand, within BWI76_RS17190 at 3563.466 kb on + strand, within BWI76_RS17195 at 3563.639 kb on + strand at 3563.776 kb on - strand, within BWI76_RS17200 at 3563.964 kb on - strand at 3563.964 kb on - strand at 3563.978 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C) remove 3,561,767 + BWI76_RS17185 0.39 +0.1 3,562,198 + BWI76_RS17185 0.89 +0.7 3,562,548 + BWI76_RS17190 0.31 -2.9 3,562,960 - BWI76_RS17190 0.87 -3.5 3,562,965 - BWI76_RS17190 0.88 -1.8 3,563,466 + BWI76_RS17195 0.67 -1.0 3,563,639 + +0.1 3,563,776 - BWI76_RS17200 0.54 -0.1 3,563,964 - -0.5 3,563,964 - +0.9 3,563,978 - +1.9
Or see this region's nucleotide sequence