Experiment: 2-Deoxyadenosine 4 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15830 and BWI76_RS15835 are separated by 7 nucleotides BWI76_RS15835 and BWI76_RS15840 are separated by 151 nucleotides BWI76_RS15840 and BWI76_RS15845 overlap by 17 nucleotides
BWI76_RS15830: BWI76_RS15830 - hypothetical protein, at 3,290,662 to 3,291,666
_RS15830
BWI76_RS15835: BWI76_RS15835 - hypothetical protein, at 3,291,674 to 3,291,871
_RS15835
BWI76_RS15840: BWI76_RS15840 - prophage protein, at 3,292,023 to 3,292,805
_RS15840
BWI76_RS15845: BWI76_RS15845 - hypothetical protein, at 3,292,789 to 3,293,079
_RS15845
Position (kb)
3291
3292 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 3290.743 kb on + strand at 3290.827 kb on + strand, within BWI76_RS15830 at 3290.862 kb on - strand, within BWI76_RS15830 at 3290.869 kb on + strand, within BWI76_RS15830 at 3290.869 kb on + strand, within BWI76_RS15830 at 3290.877 kb on - strand, within BWI76_RS15830 at 3290.889 kb on + strand, within BWI76_RS15830 at 3291.006 kb on + strand, within BWI76_RS15830 at 3291.068 kb on - strand, within BWI76_RS15830 at 3291.241 kb on + strand, within BWI76_RS15830 at 3291.274 kb on - strand, within BWI76_RS15830 at 3291.377 kb on - strand, within BWI76_RS15830 at 3291.400 kb on + strand, within BWI76_RS15830 at 3291.535 kb on - strand, within BWI76_RS15830 at 3291.559 kb on - strand, within BWI76_RS15830 at 3291.559 kb on - strand, within BWI76_RS15830 at 3291.589 kb on - strand at 3291.708 kb on - strand, within BWI76_RS15835 at 3291.716 kb on - strand, within BWI76_RS15835 at 3291.801 kb on + strand, within BWI76_RS15835 at 3291.830 kb on + strand, within BWI76_RS15835 at 3292.119 kb on + strand, within BWI76_RS15840 at 3292.119 kb on + strand, within BWI76_RS15840 at 3292.126 kb on - strand, within BWI76_RS15840 at 3292.127 kb on - strand, within BWI76_RS15840 at 3292.295 kb on + strand, within BWI76_RS15840 at 3292.349 kb on + strand, within BWI76_RS15840 at 3292.349 kb on - strand, within BWI76_RS15840 at 3292.520 kb on + strand, within BWI76_RS15840 at 3292.520 kb on + strand, within BWI76_RS15840 at 3292.520 kb on + strand, within BWI76_RS15840 at 3292.528 kb on - strand, within BWI76_RS15840 at 3292.528 kb on - strand, within BWI76_RS15840 at 3292.674 kb on - strand, within BWI76_RS15840 at 3292.787 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C) remove 3,290,743 + -5.2 3,290,827 + BWI76_RS15830 0.16 -3.1 3,290,862 - BWI76_RS15830 0.20 +0.6 3,290,869 + BWI76_RS15830 0.21 -5.7 3,290,869 + BWI76_RS15830 0.21 -4.7 3,290,877 - BWI76_RS15830 0.21 +0.6 3,290,889 + BWI76_RS15830 0.23 -3.6 3,291,006 + BWI76_RS15830 0.34 -4.2 3,291,068 - BWI76_RS15830 0.40 -0.1 3,291,241 + BWI76_RS15830 0.58 -4.4 3,291,274 - BWI76_RS15830 0.61 +0.5 3,291,377 - BWI76_RS15830 0.71 +0.0 3,291,400 + BWI76_RS15830 0.73 -3.9 3,291,535 - BWI76_RS15830 0.87 +0.6 3,291,559 - BWI76_RS15830 0.89 -0.2 3,291,559 - BWI76_RS15830 0.89 +0.0 3,291,589 - +1.2 3,291,708 - BWI76_RS15835 0.17 +0.1 3,291,716 - BWI76_RS15835 0.21 +1.4 3,291,801 + BWI76_RS15835 0.64 -5.3 3,291,830 + BWI76_RS15835 0.79 -5.8 3,292,119 + BWI76_RS15840 0.12 -1.8 3,292,119 + BWI76_RS15840 0.12 -2.6 3,292,126 - BWI76_RS15840 0.13 -1.2 3,292,127 - BWI76_RS15840 0.13 +0.1 3,292,295 + BWI76_RS15840 0.35 -2.2 3,292,349 + BWI76_RS15840 0.42 -2.6 3,292,349 - BWI76_RS15840 0.42 +0.2 3,292,520 + BWI76_RS15840 0.63 -0.3 3,292,520 + BWI76_RS15840 0.63 -5.1 3,292,520 + BWI76_RS15840 0.63 +1.3 3,292,528 - BWI76_RS15840 0.64 +0.8 3,292,528 - BWI76_RS15840 0.64 +0.6 3,292,674 - BWI76_RS15840 0.83 +0.2 3,292,787 - -2.0
Or see this region's nucleotide sequence