Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS15670

Experiment: 2-Deoxyadenosine 4 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS15660 and BWI76_RS15665 are separated by 31 nucleotidesBWI76_RS15665 and BWI76_RS15670 are separated by 274 nucleotidesBWI76_RS15670 and BWI76_RS15675 are separated by 69 nucleotidesBWI76_RS15675 and BWI76_RS15680 are separated by 111 nucleotidesBWI76_RS15680 and BWI76_RS15685 are separated by 85 nucleotidesBWI76_RS15685 and BWI76_RS15690 overlap by 50 nucleotides BWI76_RS15660: BWI76_RS15660 - hypothetical protein, at 3,273,317 to 3,273,796 _RS15660 BWI76_RS15665: BWI76_RS15665 - hypothetical protein, at 3,273,828 to 3,274,475 _RS15665 BWI76_RS15670: BWI76_RS15670 - hypothetical protein, at 3,274,750 to 3,274,950 _RS15670 BWI76_RS15675: BWI76_RS15675 - hypothetical protein, at 3,275,020 to 3,275,265 _RS15675 BWI76_RS15680: BWI76_RS15680 - hypothetical protein, at 3,275,377 to 3,275,562 _RS15680 BWI76_RS15685: BWI76_RS15685 - hypothetical protein, at 3,275,648 to 3,275,839 _RS15685 BWI76_RS15690: BWI76_RS15690 - hypothetical protein, at 3,275,790 to 3,276,065 _RS15690 Position (kb) 3274 3275Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3273.809 kb on + strandat 3273.817 kb on - strandat 3273.817 kb on - strandat 3273.867 kb on - strandat 3273.918 kb on - strand, within BWI76_RS15665at 3274.043 kb on - strand, within BWI76_RS15665at 3274.069 kb on + strand, within BWI76_RS15665at 3274.327 kb on + strand, within BWI76_RS15665at 3274.458 kb on + strandat 3274.487 kb on - strandat 3274.489 kb on - strandat 3274.494 kb on - strandat 3274.621 kb on + strandat 3274.867 kb on - strand, within BWI76_RS15670at 3274.872 kb on + strand, within BWI76_RS15670at 3274.872 kb on + strand, within BWI76_RS15670at 3274.894 kb on - strand, within BWI76_RS15670at 3275.005 kb on + strandat 3275.008 kb on - strandat 3275.165 kb on + strand, within BWI76_RS15675at 3275.186 kb on + strand, within BWI76_RS15675at 3275.194 kb on - strand, within BWI76_RS15675at 3275.194 kb on - strand, within BWI76_RS15675at 3275.194 kb on - strand, within BWI76_RS15675at 3275.221 kb on - strand, within BWI76_RS15675at 3275.221 kb on - strand, within BWI76_RS15675at 3275.278 kb on + strandat 3275.322 kb on - strandat 3275.491 kb on + strand, within BWI76_RS15680at 3275.514 kb on - strand, within BWI76_RS15680at 3275.533 kb on + strand, within BWI76_RS15680at 3275.611 kb on + strandat 3275.619 kb on - strandat 3275.676 kb on - strand, within BWI76_RS15685at 3275.808 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C)
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3,273,809 + -1.1
3,273,817 - -2.2
3,273,817 - -3.0
3,273,867 - +2.1
3,273,918 - BWI76_RS15665 0.14 -2.1
3,274,043 - BWI76_RS15665 0.33 -0.6
3,274,069 + BWI76_RS15665 0.37 +0.3
3,274,327 + BWI76_RS15665 0.77 -0.1
3,274,458 + -0.9
3,274,487 - -0.6
3,274,489 - +0.3
3,274,494 - -0.8
3,274,621 + -0.2
3,274,867 - BWI76_RS15670 0.58 +0.3
3,274,872 + BWI76_RS15670 0.61 +1.5
3,274,872 + BWI76_RS15670 0.61 +1.4
3,274,894 - BWI76_RS15670 0.72 +0.5
3,275,005 + -2.6
3,275,008 - -0.4
3,275,165 + BWI76_RS15675 0.59 -0.3
3,275,186 + BWI76_RS15675 0.67 -0.4
3,275,194 - BWI76_RS15675 0.71 -0.6
3,275,194 - BWI76_RS15675 0.71 -0.1
3,275,194 - BWI76_RS15675 0.71 -1.3
3,275,221 - BWI76_RS15675 0.82 -0.5
3,275,221 - BWI76_RS15675 0.82 +0.9
3,275,278 + -0.0
3,275,322 - -1.4
3,275,491 + BWI76_RS15680 0.61 +0.3
3,275,514 - BWI76_RS15680 0.74 +0.1
3,275,533 + BWI76_RS15680 0.84 -0.8
3,275,611 + -2.2
3,275,619 - +0.8
3,275,676 - BWI76_RS15685 0.15 -2.2
3,275,808 + -0.6

Or see this region's nucleotide sequence