Experiment: 2-Deoxyadenosine 4 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14760 and BWI76_RS14765 overlap by 4 nucleotides BWI76_RS14765 and BWI76_RS14770 are separated by 25 nucleotides BWI76_RS14770 and BWI76_RS14775 overlap by 8 nucleotides BWI76_RS14775 and BWI76_RS14780 are separated by 9 nucleotides
BWI76_RS14760: BWI76_RS14760 - PTS ascorbate transporter subunit IIC, at 3,096,711 to 3,098,021
_RS14760
BWI76_RS14765: BWI76_RS14765 - PTS lactose/cellobiose transporter subunit IIB, at 3,098,018 to 3,098,305
_RS14765
BWI76_RS14770: BWI76_RS14770 - PTS IIA 2 domain protein, at 3,098,331 to 3,098,774
_RS14770
BWI76_RS14775: BWI76_RS14775 - creatinine amidohydrolase, at 3,098,767 to 3,099,507
_RS14775
BWI76_RS14780: BWI76_RS14780 - phosphotriesterase, at 3,099,517 to 3,100,488
_RS14780
Position (kb)
3098
3099
3100 Strain fitness (log2 ratio)
-2
-1
0
1 at 3097.780 kb on - strand, within BWI76_RS14760 at 3097.816 kb on + strand, within BWI76_RS14760 at 3097.877 kb on - strand, within BWI76_RS14760 at 3097.943 kb on - strand at 3098.043 kb on + strand at 3098.104 kb on + strand, within BWI76_RS14765 at 3098.169 kb on - strand, within BWI76_RS14765 at 3098.218 kb on - strand, within BWI76_RS14765 at 3098.449 kb on - strand, within BWI76_RS14770 at 3098.731 kb on - strand at 3098.906 kb on + strand, within BWI76_RS14775 at 3099.126 kb on + strand at 3099.191 kb on + strand, within BWI76_RS14775 at 3099.743 kb on + strand, within BWI76_RS14780 at 3100.077 kb on + strand, within BWI76_RS14780 at 3100.176 kb on - strand, within BWI76_RS14780
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C) remove 3,097,780 - BWI76_RS14760 0.82 -0.9 3,097,816 + BWI76_RS14760 0.84 +0.2 3,097,877 - BWI76_RS14760 0.89 +0.9 3,097,943 - -0.7 3,098,043 + +0.8 3,098,104 + BWI76_RS14765 0.30 +1.6 3,098,169 - BWI76_RS14765 0.52 -0.1 3,098,218 - BWI76_RS14765 0.69 +1.0 3,098,449 - BWI76_RS14770 0.27 -0.7 3,098,731 - -1.3 3,098,906 + BWI76_RS14775 0.19 -2.6 3,099,126 + +0.8 3,099,191 + BWI76_RS14775 0.57 +1.1 3,099,743 + BWI76_RS14780 0.23 -0.5 3,100,077 + BWI76_RS14780 0.58 -1.8 3,100,176 - BWI76_RS14780 0.68 -0.3
Or see this region's nucleotide sequence