Experiment: 2-Deoxyadenosine 4 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13240 and BWI76_RS13245 are separated by 318 nucleotides BWI76_RS13245 and BWI76_RS13250 are separated by 225 nucleotides BWI76_RS13250 and BWI76_RS13255 are separated by 169 nucleotides BWI76_RS13255 and BWI76_RS13260 are separated by 22 nucleotides
BWI76_RS13240: BWI76_RS13240 - hypothetical protein, at 2,762,639 to 2,762,836
_RS13240
BWI76_RS13245: BWI76_RS13245 - DNA-damage-inducible protein I, at 2,763,155 to 2,763,397
_RS13245
BWI76_RS13250: BWI76_RS13250 - cytochrome b561, at 2,763,623 to 2,764,150
_RS13250
BWI76_RS13255: BWI76_RS13255 - hypothetical protein, at 2,764,320 to 2,764,595
_RS13255
BWI76_RS13260: BWI76_RS13260 - S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase, at 2,764,618 to 2,765,736
_RS13260
Position (kb)
2763
2764
2765 Strain fitness (log2 ratio)
-1
0
1 at 2762.757 kb on - strand, within BWI76_RS13240 at 2763.340 kb on + strand, within BWI76_RS13245 at 2763.350 kb on + strand, within BWI76_RS13245 at 2763.465 kb on - strand at 2763.471 kb on - strand at 2763.472 kb on - strand at 2763.518 kb on - strand at 2763.518 kb on - strand at 2763.838 kb on + strand, within BWI76_RS13250 at 2764.748 kb on + strand, within BWI76_RS13260 at 2764.756 kb on - strand, within BWI76_RS13260 at 2764.792 kb on + strand, within BWI76_RS13260
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C) remove 2,762,757 - BWI76_RS13240 0.60 +1.0 2,763,340 + BWI76_RS13245 0.76 -0.0 2,763,350 + BWI76_RS13245 0.80 -1.1 2,763,465 - -0.5 2,763,471 - -1.4 2,763,472 - -0.7 2,763,518 - +0.2 2,763,518 - +0.7 2,763,838 + BWI76_RS13250 0.41 +0.7 2,764,748 + BWI76_RS13260 0.12 +0.6 2,764,756 - BWI76_RS13260 0.12 +0.6 2,764,792 + BWI76_RS13260 0.16 -0.1
Or see this region's nucleotide sequence