Experiment: 2-Deoxyadenosine 4 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11450 and BWI76_RS11455 are separated by 100 nucleotides BWI76_RS11455 and BWI76_RS11460 overlap by 17 nucleotides BWI76_RS11460 and BWI76_RS11465 are separated by 152 nucleotides BWI76_RS11465 and BWI76_RS11470 are separated by 27 nucleotides
BWI76_RS11450: BWI76_RS11450 - cyanate MFS transporter, at 2,409,682 to 2,410,866
_RS11450
BWI76_RS11455: BWI76_RS11455 - AraC family transcriptional regulator, at 2,410,967 to 2,411,758
_RS11455
BWI76_RS11460: BWI76_RS11460 - DUF441 family protein, at 2,411,742 to 2,412,188
_RS11460
BWI76_RS11465: BWI76_RS11465 - hypothetical protein, at 2,412,341 to 2,412,841
_RS11465
BWI76_RS11470: BWI76_RS11470 - sensor domain-containing diguanylate cyclase, at 2,412,869 to 2,414,371
_RS11470
Position (kb)
2411
2412
2413 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2410.837 kb on + strand at 2411.331 kb on + strand, within BWI76_RS11455 at 2411.569 kb on - strand, within BWI76_RS11455 at 2411.656 kb on - strand, within BWI76_RS11455 at 2411.861 kb on + strand, within BWI76_RS11460 at 2412.074 kb on + strand, within BWI76_RS11460 at 2412.164 kb on - strand at 2412.181 kb on - strand at 2412.197 kb on - strand at 2412.197 kb on - strand at 2412.367 kb on + strand at 2412.558 kb on + strand, within BWI76_RS11465 at 2412.680 kb on + strand, within BWI76_RS11465 at 2412.696 kb on + strand, within BWI76_RS11465 at 2412.773 kb on - strand, within BWI76_RS11465 at 2412.980 kb on + strand at 2413.026 kb on + strand, within BWI76_RS11470 at 2413.041 kb on - strand, within BWI76_RS11470 at 2413.125 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C) remove 2,410,837 + -0.1 2,411,331 + BWI76_RS11455 0.46 -0.2 2,411,569 - BWI76_RS11455 0.76 +0.7 2,411,656 - BWI76_RS11455 0.87 -0.6 2,411,861 + BWI76_RS11460 0.27 +1.2 2,412,074 + BWI76_RS11460 0.74 +0.5 2,412,164 - +0.4 2,412,181 - +0.9 2,412,197 - -2.2 2,412,197 - +0.9 2,412,367 + -0.7 2,412,558 + BWI76_RS11465 0.43 +0.1 2,412,680 + BWI76_RS11465 0.68 -0.2 2,412,696 + BWI76_RS11465 0.71 -3.2 2,412,773 - BWI76_RS11465 0.86 -0.0 2,412,980 + +1.1 2,413,026 + BWI76_RS11470 0.10 -3.6 2,413,041 - BWI76_RS11470 0.11 +0.5 2,413,125 - +1.0
Or see this region's nucleotide sequence