Experiment: 2-Deoxyadenosine 4 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09715 and BWI76_RS09720 are separated by 17 nucleotides BWI76_RS09720 and BWI76_RS09725 are separated by 122 nucleotides BWI76_RS09725 and BWI76_RS09730 are separated by 53 nucleotides BWI76_RS09730 and BWI76_RS09735 are separated by 203 nucleotides
BWI76_RS09715: BWI76_RS09715 - hypothetical protein, at 2,036,291 to 2,037,556
_RS09715
BWI76_RS09720: BWI76_RS09720 - PTS ascorbate transporter subunit IIB, at 2,037,574 to 2,037,849
_RS09720
BWI76_RS09725: BWI76_RS09725 - MurR/RpiR family transcriptional regulator, at 2,037,972 to 2,038,829
_RS09725
BWI76_RS09730: BWI76_RS09730 - pyruvate formate lyase 1-activating protein, at 2,038,883 to 2,039,623
_RS09730
BWI76_RS09735: BWI76_RS09735 - formate acetyltransferase, at 2,039,827 to 2,042,109
_RS09735
Position (kb)
2037
2038
2039 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2036.998 kb on - strand, within BWI76_RS09715 at 2037.174 kb on + strand, within BWI76_RS09715 at 2037.228 kb on - strand, within BWI76_RS09715 at 2037.605 kb on + strand, within BWI76_RS09720 at 2037.623 kb on - strand, within BWI76_RS09720 at 2037.628 kb on - strand, within BWI76_RS09720 at 2037.728 kb on + strand, within BWI76_RS09720 at 2037.855 kb on + strand at 2038.181 kb on + strand, within BWI76_RS09725 at 2038.544 kb on + strand, within BWI76_RS09725 at 2038.585 kb on + strand, within BWI76_RS09725 at 2038.785 kb on + strand at 2038.881 kb on + strand at 2039.113 kb on - strand, within BWI76_RS09730 at 2039.385 kb on - strand, within BWI76_RS09730 at 2039.572 kb on - strand at 2039.746 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C) remove 2,036,998 - BWI76_RS09715 0.56 +0.4 2,037,174 + BWI76_RS09715 0.70 +0.9 2,037,228 - BWI76_RS09715 0.74 +1.0 2,037,605 + BWI76_RS09720 0.11 -0.3 2,037,623 - BWI76_RS09720 0.18 -3.3 2,037,628 - BWI76_RS09720 0.20 -0.7 2,037,728 + BWI76_RS09720 0.56 +1.5 2,037,855 + -1.5 2,038,181 + BWI76_RS09725 0.24 -0.4 2,038,544 + BWI76_RS09725 0.67 -1.9 2,038,585 + BWI76_RS09725 0.71 -1.2 2,038,785 + +0.5 2,038,881 + -1.7 2,039,113 - BWI76_RS09730 0.31 -0.7 2,039,385 - BWI76_RS09730 0.68 -0.7 2,039,572 - +0.3 2,039,746 - +0.1
Or see this region's nucleotide sequence