Experiment: 2-Deoxyadenosine 4 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS08725 and BWI76_RS08730 are separated by 53 nucleotides BWI76_RS08730 and BWI76_RS08735 are separated by 143 nucleotides BWI76_RS08735 and BWI76_RS08740 overlap by 4 nucleotides
BWI76_RS08725: BWI76_RS08725 - Formiminoglutamase (EC 3.5.3.8) (from data) , at 1,837,820 to 1,838,776
_RS08725
BWI76_RS08730: BWI76_RS08730 - histidine utilization repressor, at 1,838,830 to 1,839,555
_RS08730
BWI76_RS08735: BWI76_RS08735 - Urocanate hydratase (EC 4.2.1.49) (from data) , at 1,839,699 to 1,841,387
_RS08735
BWI76_RS08740: BWI76_RS08740 - Histidine ammonia-lyase (EC 4.3.1.3) (from data) , at 1,841,384 to 1,842,907
_RS08740
Position (kb)
1839
1840
1841
1842 Strain fitness (log2 ratio)
-2
-1
0
1 at 1839.414 kb on - strand, within BWI76_RS08730 at 1839.414 kb on - strand, within BWI76_RS08730 at 1839.482 kb on - strand, within BWI76_RS08730 at 1839.640 kb on - strand at 1840.194 kb on - strand, within BWI76_RS08735 at 1840.386 kb on + strand, within BWI76_RS08735 at 1840.558 kb on - strand, within BWI76_RS08735 at 1840.895 kb on + strand, within BWI76_RS08735 at 1841.111 kb on + strand, within BWI76_RS08735 at 1841.181 kb on - strand, within BWI76_RS08735 at 1841.844 kb on + strand, within BWI76_RS08740 at 1841.968 kb on + strand, within BWI76_RS08740 at 1842.064 kb on - strand, within BWI76_RS08740 at 1842.136 kb on + strand at 1842.263 kb on + strand, within BWI76_RS08740 at 1842.272 kb on - strand, within BWI76_RS08740
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C) remove 1,839,414 - BWI76_RS08730 0.80 -1.5 1,839,414 - BWI76_RS08730 0.80 -0.3 1,839,482 - BWI76_RS08730 0.90 -1.7 1,839,640 - -1.6 1,840,194 - BWI76_RS08735 0.29 -0.3 1,840,386 + BWI76_RS08735 0.41 +0.9 1,840,558 - BWI76_RS08735 0.51 +1.3 1,840,895 + BWI76_RS08735 0.71 -0.9 1,841,111 + BWI76_RS08735 0.84 -1.2 1,841,181 - BWI76_RS08735 0.88 -0.7 1,841,844 + BWI76_RS08740 0.30 -1.0 1,841,968 + BWI76_RS08740 0.38 -0.0 1,842,064 - BWI76_RS08740 0.45 -0.5 1,842,136 + +1.6 1,842,263 + BWI76_RS08740 0.58 +1.0 1,842,272 - BWI76_RS08740 0.58 -2.3
Or see this region's nucleotide sequence