Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07675

Experiment: 2-Deoxyadenosine 4 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS07670 and BWI76_RS07675 are separated by 363 nucleotidesBWI76_RS07675 and BWI76_RS07680 are separated by 364 nucleotides BWI76_RS07670: BWI76_RS07670 - carbohydrate kinase, at 1,624,140 to 1,625,660 _RS07670 BWI76_RS07675: BWI76_RS07675 - DeoR family transcriptional regulator, at 1,626,024 to 1,626,974 _RS07675 BWI76_RS07680: BWI76_RS07680 - transketolase, at 1,627,339 to 1,628,169 _RS07680 Position (kb) 1626 1627Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 1625.165 kb on - strand, within BWI76_RS07670at 1625.253 kb on - strand, within BWI76_RS07670at 1625.289 kb on - strand, within BWI76_RS07670at 1625.305 kb on - strand, within BWI76_RS07670at 1625.501 kb on - strand, within BWI76_RS07670at 1625.503 kb on + strand, within BWI76_RS07670at 1625.740 kb on - strandat 1625.883 kb on - strandat 1626.201 kb on + strand, within BWI76_RS07675at 1626.433 kb on - strand, within BWI76_RS07675at 1626.445 kb on - strand, within BWI76_RS07675at 1626.746 kb on + strand, within BWI76_RS07675at 1626.824 kb on - strand, within BWI76_RS07675at 1626.905 kb on + strandat 1626.927 kb on - strandat 1627.011 kb on - strandat 1627.181 kb on - strandat 1627.204 kb on + strandat 1627.251 kb on - strandat 1627.388 kb on - strandat 1627.482 kb on + strand, within BWI76_RS07680at 1627.564 kb on - strand, within BWI76_RS07680at 1627.817 kb on - strand, within BWI76_RS07680

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C)
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1,625,165 - BWI76_RS07670 0.67 +1.5
1,625,253 - BWI76_RS07670 0.73 +0.3
1,625,289 - BWI76_RS07670 0.76 -0.8
1,625,305 - BWI76_RS07670 0.77 -1.4
1,625,501 - BWI76_RS07670 0.89 +0.4
1,625,503 + BWI76_RS07670 0.90 -2.2
1,625,740 - -0.3
1,625,883 - +0.2
1,626,201 + BWI76_RS07675 0.19 -0.5
1,626,433 - BWI76_RS07675 0.43 -4.5
1,626,445 - BWI76_RS07675 0.44 -0.0
1,626,746 + BWI76_RS07675 0.76 -3.2
1,626,824 - BWI76_RS07675 0.84 -1.9
1,626,905 + +1.0
1,626,927 - +0.2
1,627,011 - -3.4
1,627,181 - -2.4
1,627,204 + +0.7
1,627,251 - -0.2
1,627,388 - -0.2
1,627,482 + BWI76_RS07680 0.17 +0.2
1,627,564 - BWI76_RS07680 0.27 -0.0
1,627,817 - BWI76_RS07680 0.58 -0.3

Or see this region's nucleotide sequence