Experiment: 2-Deoxyadenosine 4 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS05915 and BWI76_RS05920 are separated by 152 nucleotides BWI76_RS05920 and BWI76_RS05925 are separated by 60 nucleotides BWI76_RS05925 and BWI76_RS05930 are separated by 25 nucleotides
BWI76_RS05915: BWI76_RS05915 - helix-turn-helix transcriptional regulator, at 1,243,472 to 1,244,014
_RS05915
BWI76_RS05920: BWI76_RS05920 - fimbrillin MatB, at 1,244,167 to 1,244,754
_RS05920
BWI76_RS05925: BWI76_RS05925 - hypothetical protein, at 1,244,815 to 1,245,483
_RS05925
BWI76_RS05930: BWI76_RS05930 - hypothetical protein, at 1,245,509 to 1,248,034
_RS05930
Position (kb)
1244
1245
1246 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 1243.884 kb on + strand at 1243.949 kb on + strand, within BWI76_RS05915 at 1243.957 kb on - strand, within BWI76_RS05915 at 1243.963 kb on + strand at 1243.996 kb on + strand at 1244.011 kb on + strand at 1244.050 kb on + strand at 1244.050 kb on + strand at 1244.093 kb on + strand at 1244.093 kb on + strand at 1244.093 kb on + strand at 1244.093 kb on + strand at 1244.093 kb on + strand at 1244.093 kb on + strand at 1244.094 kb on + strand at 1244.094 kb on + strand at 1244.095 kb on + strand at 1244.098 kb on + strand at 1244.098 kb on + strand at 1244.098 kb on + strand at 1244.098 kb on + strand at 1244.098 kb on + strand at 1244.101 kb on - strand at 1244.101 kb on - strand at 1244.101 kb on - strand at 1244.106 kb on - strand at 1244.106 kb on - strand at 1244.117 kb on + strand at 1244.122 kb on + strand at 1244.122 kb on + strand at 1244.124 kb on + strand at 1244.128 kb on - strand at 1244.130 kb on - strand at 1244.131 kb on + strand at 1244.131 kb on + strand at 1244.186 kb on + strand at 1244.194 kb on - strand at 1244.218 kb on + strand at 1244.233 kb on + strand, within BWI76_RS05920 at 1244.238 kb on + strand, within BWI76_RS05920 at 1244.239 kb on - strand at 1244.246 kb on - strand, within BWI76_RS05920 at 1244.252 kb on - strand, within BWI76_RS05920 at 1244.262 kb on - strand, within BWI76_RS05920 at 1244.297 kb on + strand, within BWI76_RS05920 at 1244.301 kb on + strand, within BWI76_RS05920 at 1244.311 kb on + strand, within BWI76_RS05920 at 1244.338 kb on + strand, within BWI76_RS05920 at 1244.346 kb on + strand, within BWI76_RS05920 at 1244.346 kb on - strand, within BWI76_RS05920 at 1244.414 kb on + strand, within BWI76_RS05920 at 1244.465 kb on + strand, within BWI76_RS05920 at 1244.583 kb on + strand, within BWI76_RS05920 at 1244.589 kb on + strand, within BWI76_RS05920 at 1244.599 kb on - strand, within BWI76_RS05920 at 1244.627 kb on + strand, within BWI76_RS05920 at 1244.635 kb on - strand, within BWI76_RS05920 at 1244.740 kb on + strand at 1244.748 kb on - strand at 1244.798 kb on - strand at 1244.848 kb on - strand at 1245.003 kb on - strand, within BWI76_RS05925 at 1245.140 kb on - strand, within BWI76_RS05925 at 1245.165 kb on + strand, within BWI76_RS05925 at 1245.175 kb on - strand, within BWI76_RS05925 at 1245.227 kb on + strand, within BWI76_RS05925 at 1245.291 kb on + strand, within BWI76_RS05925 at 1245.291 kb on + strand, within BWI76_RS05925 at 1245.737 kb on + strand at 1245.737 kb on + strand at 1245.745 kb on - strand at 1245.759 kb on - strand at 1245.876 kb on + strand, within BWI76_RS05930 at 1245.915 kb on - strand, within BWI76_RS05930 at 1245.968 kb on - strand, within BWI76_RS05930 at 1245.994 kb on - strand, within BWI76_RS05930 at 1246.029 kb on + strand, within BWI76_RS05930 at 1246.036 kb on + strand, within BWI76_RS05930 at 1246.153 kb on + strand, within BWI76_RS05930 at 1246.154 kb on + strand, within BWI76_RS05930 at 1246.155 kb on + strand, within BWI76_RS05930 at 1246.163 kb on - strand, within BWI76_RS05930 at 1246.177 kb on - strand, within BWI76_RS05930 at 1246.263 kb on + strand, within BWI76_RS05930 at 1246.408 kb on - strand, within BWI76_RS05930 at 1246.418 kb on + strand, within BWI76_RS05930
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C) remove 1,243,884 + +0.0 1,243,949 + BWI76_RS05915 0.88 -1.0 1,243,957 - BWI76_RS05915 0.89 -0.3 1,243,963 + +0.4 1,243,996 + +0.1 1,244,011 + -0.1 1,244,050 + +0.8 1,244,050 + +0.0 1,244,093 + +0.8 1,244,093 + +0.4 1,244,093 + -0.8 1,244,093 + -0.1 1,244,093 + +0.1 1,244,093 + -0.8 1,244,094 + +0.4 1,244,094 + +0.4 1,244,095 + -0.3 1,244,098 + -0.3 1,244,098 + -0.9 1,244,098 + -0.2 1,244,098 + +0.9 1,244,098 + +0.3 1,244,101 - +1.6 1,244,101 - +0.3 1,244,101 - -1.8 1,244,106 - +0.0 1,244,106 - -0.3 1,244,117 + +0.5 1,244,122 + +0.0 1,244,122 + +0.0 1,244,124 + +0.1 1,244,128 - +1.9 1,244,130 - +1.1 1,244,131 + +1.0 1,244,131 + +0.6 1,244,186 + -1.3 1,244,194 - -1.0 1,244,218 + +0.4 1,244,233 + BWI76_RS05920 0.11 +1.4 1,244,238 + BWI76_RS05920 0.12 +0.3 1,244,239 - +0.0 1,244,246 - BWI76_RS05920 0.13 +1.0 1,244,252 - BWI76_RS05920 0.14 +1.4 1,244,262 - BWI76_RS05920 0.16 -0.3 1,244,297 + BWI76_RS05920 0.22 +0.5 1,244,301 + BWI76_RS05920 0.23 -0.5 1,244,311 + BWI76_RS05920 0.24 -0.2 1,244,338 + BWI76_RS05920 0.29 -0.2 1,244,346 + BWI76_RS05920 0.30 -1.0 1,244,346 - BWI76_RS05920 0.30 +0.8 1,244,414 + BWI76_RS05920 0.42 +3.1 1,244,465 + BWI76_RS05920 0.51 -0.5 1,244,583 + BWI76_RS05920 0.71 -3.4 1,244,589 + BWI76_RS05920 0.72 +0.1 1,244,599 - BWI76_RS05920 0.73 +2.0 1,244,627 + BWI76_RS05920 0.78 -0.3 1,244,635 - BWI76_RS05920 0.80 +0.7 1,244,740 + +1.2 1,244,748 - +1.0 1,244,798 - -2.1 1,244,848 - +0.6 1,245,003 - BWI76_RS05925 0.28 -3.1 1,245,140 - BWI76_RS05925 0.49 +0.2 1,245,165 + BWI76_RS05925 0.52 -2.2 1,245,175 - BWI76_RS05925 0.54 -1.0 1,245,227 + BWI76_RS05925 0.62 -2.7 1,245,291 + BWI76_RS05925 0.71 -2.2 1,245,291 + BWI76_RS05925 0.71 -0.5 1,245,737 + +1.5 1,245,737 + +0.2 1,245,745 - +1.0 1,245,759 - -1.0 1,245,876 + BWI76_RS05930 0.15 +0.4 1,245,915 - BWI76_RS05930 0.16 +0.5 1,245,968 - BWI76_RS05930 0.18 -4.0 1,245,994 - BWI76_RS05930 0.19 -0.1 1,246,029 + BWI76_RS05930 0.21 +0.5 1,246,036 + BWI76_RS05930 0.21 +0.5 1,246,153 + BWI76_RS05930 0.25 -1.0 1,246,154 + BWI76_RS05930 0.26 +0.8 1,246,155 + BWI76_RS05930 0.26 -1.9 1,246,163 - BWI76_RS05930 0.26 -0.9 1,246,177 - BWI76_RS05930 0.26 -0.1 1,246,263 + BWI76_RS05930 0.30 +0.1 1,246,408 - BWI76_RS05930 0.36 -0.3 1,246,418 + BWI76_RS05930 0.36 -0.6
Or see this region's nucleotide sequence