Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS04655

Experiment: 2-Deoxyadenosine 4 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS04650 and BWI76_RS04655 are separated by 11 nucleotidesBWI76_RS04655 and BWI76_RS04660 are separated by 10 nucleotides BWI76_RS04650: BWI76_RS04650 - MFS transporter, at 968,531 to 969,745 _RS04650 BWI76_RS04655: BWI76_RS04655 - shikimate dehydrogenase, at 969,757 to 970,620 _RS04655 BWI76_RS04660: BWI76_RS04660 - 2,4-dienoyl-CoA reductase, at 970,631 to 972,664 _RS04660 Position (kb) 969 970 971Strain fitness (log2 ratio) -2 -1 0 1 2at 968.770 kb on - strand, within BWI76_RS04650at 968.794 kb on - strand, within BWI76_RS04650at 968.818 kb on - strand, within BWI76_RS04650at 968.990 kb on - strand, within BWI76_RS04650at 969.100 kb on + strand, within BWI76_RS04650at 969.100 kb on + strand, within BWI76_RS04650at 969.108 kb on - strand, within BWI76_RS04650at 969.137 kb on - strand, within BWI76_RS04650at 969.272 kb on + strand, within BWI76_RS04650at 969.347 kb on - strand, within BWI76_RS04650at 969.347 kb on - strand, within BWI76_RS04650at 969.347 kb on - strand, within BWI76_RS04650at 969.352 kb on + strand, within BWI76_RS04650at 969.662 kb on - strandat 969.778 kb on - strandat 969.825 kb on + strandat 969.825 kb on + strandat 969.921 kb on + strand, within BWI76_RS04655at 970.025 kb on - strandat 970.287 kb on - strand, within BWI76_RS04655at 970.356 kb on + strand, within BWI76_RS04655at 970.458 kb on - strand, within BWI76_RS04655at 970.545 kb on - strandat 970.798 kb on + strandat 970.834 kb on + strandat 970.842 kb on - strand, within BWI76_RS04660at 970.921 kb on + strand, within BWI76_RS04660at 970.932 kb on + strand, within BWI76_RS04660at 970.940 kb on - strand, within BWI76_RS04660at 970.999 kb on + strand, within BWI76_RS04660at 971.391 kb on - strand, within BWI76_RS04660at 971.511 kb on - strand, within BWI76_RS04660at 971.587 kb on - strand, within BWI76_RS04660

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C)
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968,770 - BWI76_RS04650 0.20 -0.2
968,794 - BWI76_RS04650 0.22 -2.2
968,818 - BWI76_RS04650 0.24 +0.1
968,990 - BWI76_RS04650 0.38 +0.3
969,100 + BWI76_RS04650 0.47 -0.9
969,100 + BWI76_RS04650 0.47 -0.4
969,108 - BWI76_RS04650 0.47 +0.2
969,137 - BWI76_RS04650 0.50 +0.6
969,272 + BWI76_RS04650 0.61 -1.3
969,347 - BWI76_RS04650 0.67 +0.6
969,347 - BWI76_RS04650 0.67 +1.9
969,347 - BWI76_RS04650 0.67 +1.0
969,352 + BWI76_RS04650 0.68 +0.5
969,662 - -0.4
969,778 - -1.5
969,825 + -2.2
969,825 + +0.2
969,921 + BWI76_RS04655 0.19 -0.0
970,025 - -0.5
970,287 - BWI76_RS04655 0.61 -2.2
970,356 + BWI76_RS04655 0.69 -2.5
970,458 - BWI76_RS04655 0.81 -2.3
970,545 - -2.1
970,798 + +0.3
970,834 + +1.1
970,842 - BWI76_RS04660 0.10 +1.0
970,921 + BWI76_RS04660 0.14 +1.7
970,932 + BWI76_RS04660 0.15 -0.6
970,940 - BWI76_RS04660 0.15 -1.2
970,999 + BWI76_RS04660 0.18 +0.1
971,391 - BWI76_RS04660 0.37 +0.7
971,511 - BWI76_RS04660 0.43 -0.5
971,587 - BWI76_RS04660 0.47 -2.2

Or see this region's nucleotide sequence