Experiment: 2-Deoxyadenosine 4 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS04245 and BWI76_RS04250 are separated by 1 nucleotides BWI76_RS04250 and BWI76_RS04255 are separated by 3 nucleotides BWI76_RS04255 and BWI76_RS04260 are separated by 51 nucleotides BWI76_RS04260 and BWI76_RS04265 are separated by 77 nucleotides
BWI76_RS04245: BWI76_RS04245 - bifunctional aspartate kinase/homoserine dehydrogenase I, at 872,525 to 874,987
_RS04245
BWI76_RS04250: BWI76_RS04250 - homoserine kinase, at 874,989 to 875,918
_RS04250
BWI76_RS04255: BWI76_RS04255 - threonine synthase, at 875,922 to 877,202
_RS04255
BWI76_RS04260: BWI76_RS04260 - peroxide stress protein YaaA, at 877,254 to 878,027
_RS04260
BWI76_RS04265: BWI76_RS04265 - sodium:alanine symporter family protein, at 878,105 to 879,535
_RS04265
Position (kb) 875
876
877
878 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 874.949 kb on + strand at 875.101 kb on - strand, within BWI76_RS04250 at 875.266 kb on + strand, within BWI76_RS04250 at 875.274 kb on - strand, within BWI76_RS04250 at 875.422 kb on - strand, within BWI76_RS04250 at 875.516 kb on - strand, within BWI76_RS04250 at 875.539 kb on - strand at 875.587 kb on + strand, within BWI76_RS04250 at 875.595 kb on - strand, within BWI76_RS04250 at 875.599 kb on + strand, within BWI76_RS04250 at 875.615 kb on - strand, within BWI76_RS04250 at 875.846 kb on - strand at 875.962 kb on + strand at 875.965 kb on - strand at 875.970 kb on - strand at 875.987 kb on - strand at 876.169 kb on - strand, within BWI76_RS04255 at 876.213 kb on - strand, within BWI76_RS04255 at 876.223 kb on + strand, within BWI76_RS04255 at 876.398 kb on + strand, within BWI76_RS04255 at 876.428 kb on + strand, within BWI76_RS04255 at 876.620 kb on + strand, within BWI76_RS04255 at 876.620 kb on + strand, within BWI76_RS04255 at 876.644 kb on + strand, within BWI76_RS04255 at 876.644 kb on + strand, within BWI76_RS04255 at 876.812 kb on + strand, within BWI76_RS04255 at 876.812 kb on + strand, within BWI76_RS04255 at 876.820 kb on - strand, within BWI76_RS04255 at 876.820 kb on - strand, within BWI76_RS04255 at 877.744 kb on + strand, within BWI76_RS04260 at 877.854 kb on - strand, within BWI76_RS04260 at 877.928 kb on + strand, within BWI76_RS04260 at 878.022 kb on + strand at 878.031 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C) remove 874,949 + -3.0 875,101 - BWI76_RS04250 0.12 -5.2 875,266 + BWI76_RS04250 0.30 -2.6 875,274 - BWI76_RS04250 0.31 -5.4 875,422 - BWI76_RS04250 0.47 -2.5 875,516 - BWI76_RS04250 0.57 -1.4 875,539 - -1.2 875,587 + BWI76_RS04250 0.64 -2.8 875,595 - BWI76_RS04250 0.65 -2.0 875,599 + BWI76_RS04250 0.66 -2.8 875,615 - BWI76_RS04250 0.67 -2.6 875,846 - -4.9 875,962 + -4.0 875,965 - -2.6 875,970 - -2.2 875,987 - -4.6 876,169 - BWI76_RS04255 0.19 -3.4 876,213 - BWI76_RS04255 0.23 -3.2 876,223 + BWI76_RS04255 0.23 -4.1 876,398 + BWI76_RS04255 0.37 -2.0 876,428 + BWI76_RS04255 0.40 -1.7 876,620 + BWI76_RS04255 0.54 -5.4 876,620 + BWI76_RS04255 0.54 -3.0 876,644 + BWI76_RS04255 0.56 -3.2 876,644 + BWI76_RS04255 0.56 -0.9 876,812 + BWI76_RS04255 0.69 -3.0 876,812 + BWI76_RS04255 0.69 -4.9 876,820 - BWI76_RS04255 0.70 -1.4 876,820 - BWI76_RS04255 0.70 -3.7 877,744 + BWI76_RS04260 0.63 +0.3 877,854 - BWI76_RS04260 0.78 +0.4 877,928 + BWI76_RS04260 0.87 +1.1 878,022 + -1.1 878,031 - -0.4
Or see this region's nucleotide sequence