Experiment: 2-Deoxyadenosine 4 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS04115 and BWI76_RS04120 overlap by 4 nucleotides BWI76_RS04120 and BWI76_RS04125 are separated by 145 nucleotides BWI76_RS04125 and BWI76_RS04130 are separated by 414 nucleotides
BWI76_RS04115: BWI76_RS04115 - patatin family protein, at 845,881 to 846,954
_RS04115
BWI76_RS04120: BWI76_RS04120 - metal-dependent hydrolase, at 846,951 to 847,730
_RS04120
BWI76_RS04125: BWI76_RS04125 - NupC/NupG family nucleoside CNT transporter, at 847,876 to 849,153
_RS04125
BWI76_RS04130: BWI76_RS04130 - 2-deoxyribose-5-phosphate aldolase, at 849,568 to 850,347
_RS04130
Position (kb) 847
848
849
850 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 847.035 kb on + strand, within BWI76_RS04120 at 847.188 kb on - strand, within BWI76_RS04120 at 847.211 kb on + strand, within BWI76_RS04120 at 847.559 kb on + strand, within BWI76_RS04120 at 847.575 kb on - strand, within BWI76_RS04120 at 847.615 kb on + strand, within BWI76_RS04120 at 847.615 kb on + strand at 847.840 kb on + strand at 847.840 kb on + strand at 847.840 kb on + strand at 847.848 kb on - strand at 848.038 kb on - strand, within BWI76_RS04125 at 848.161 kb on + strand, within BWI76_RS04125 at 848.199 kb on - strand, within BWI76_RS04125 at 848.307 kb on - strand, within BWI76_RS04125 at 848.307 kb on - strand, within BWI76_RS04125 at 848.379 kb on + strand, within BWI76_RS04125 at 848.411 kb on - strand, within BWI76_RS04125 at 848.413 kb on + strand, within BWI76_RS04125 at 848.413 kb on + strand, within BWI76_RS04125 at 848.442 kb on + strand, within BWI76_RS04125 at 848.525 kb on - strand, within BWI76_RS04125 at 848.553 kb on + strand, within BWI76_RS04125 at 848.874 kb on + strand, within BWI76_RS04125 at 848.956 kb on - strand, within BWI76_RS04125 at 848.958 kb on + strand, within BWI76_RS04125 at 848.975 kb on + strand, within BWI76_RS04125 at 849.148 kb on + strand at 849.483 kb on - strand at 849.607 kb on - strand at 849.727 kb on - strand, within BWI76_RS04130 at 849.761 kb on + strand, within BWI76_RS04130 at 849.776 kb on + strand, within BWI76_RS04130 at 849.828 kb on + strand, within BWI76_RS04130 at 849.870 kb on - strand, within BWI76_RS04130 at 849.928 kb on - strand, within BWI76_RS04130 at 849.933 kb on - strand, within BWI76_RS04130
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C) remove 847,035 + BWI76_RS04120 0.11 +0.3 847,188 - BWI76_RS04120 0.30 +0.3 847,211 + BWI76_RS04120 0.33 +1.4 847,559 + BWI76_RS04120 0.78 -0.9 847,575 - BWI76_RS04120 0.80 +0.0 847,615 + BWI76_RS04120 0.85 -0.1 847,615 + +0.1 847,840 + -0.9 847,840 + -0.3 847,840 + +0.9 847,848 - -0.2 848,038 - BWI76_RS04125 0.13 +0.8 848,161 + BWI76_RS04125 0.22 +0.7 848,199 - BWI76_RS04125 0.25 -0.4 848,307 - BWI76_RS04125 0.34 -0.9 848,307 - BWI76_RS04125 0.34 -0.4 848,379 + BWI76_RS04125 0.39 -0.2 848,411 - BWI76_RS04125 0.42 -1.5 848,413 + BWI76_RS04125 0.42 -0.6 848,413 + BWI76_RS04125 0.42 +0.8 848,442 + BWI76_RS04125 0.44 +1.6 848,525 - BWI76_RS04125 0.51 +0.2 848,553 + BWI76_RS04125 0.53 +0.1 848,874 + BWI76_RS04125 0.78 -0.6 848,956 - BWI76_RS04125 0.85 -0.3 848,958 + BWI76_RS04125 0.85 +0.2 848,975 + BWI76_RS04125 0.86 -0.1 849,148 + +2.6 849,483 - -3.0 849,607 - -5.1 849,727 - BWI76_RS04130 0.20 -3.5 849,761 + BWI76_RS04130 0.25 -0.5 849,776 + BWI76_RS04130 0.27 -1.6 849,828 + BWI76_RS04130 0.33 -2.2 849,870 - BWI76_RS04130 0.39 -3.5 849,928 - BWI76_RS04130 0.46 -3.1 849,933 - BWI76_RS04130 0.47 -4.6
Or see this region's nucleotide sequence