Experiment: 2-Deoxyadenosine 4 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS04055 and BWI76_RS04060 are separated by 262 nucleotides BWI76_RS04060 and BWI76_RS04065 are separated by 20 nucleotides BWI76_RS04065 and BWI76_RS04070 are separated by 31 nucleotides BWI76_RS04070 and BWI76_RS04075 are separated by 28 nucleotides BWI76_RS04075 and BWI76_RS04080 are separated by 167 nucleotides
BWI76_RS04055: BWI76_RS04055 - GGDEF domain-containing protein, at 838,202 to 839,248
_RS04055
BWI76_RS04060: BWI76_RS04060 - hypothetical protein, at 839,511 to 839,750
_RS04060
BWI76_RS04065: BWI76_RS04065 - tRNA-Leu, at 839,771 to 839,857
_RS04065
BWI76_RS04070: BWI76_RS04070 - tRNA-Leu, at 839,889 to 839,975
_RS04070
BWI76_RS04075: BWI76_RS04075 - tRNA-Leu, at 840,004 to 840,090
_RS04075
BWI76_RS04080: BWI76_RS04080 - 16S rRNA (guanine(1207)-N(2))-methyltransferase, at 840,258 to 841,286
_RS04080
Position (kb)
839
840 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 838.534 kb on + strand, within BWI76_RS04055 at 838.535 kb on + strand, within BWI76_RS04055 at 838.605 kb on - strand, within BWI76_RS04055 at 838.605 kb on - strand, within BWI76_RS04055 at 838.607 kb on + strand, within BWI76_RS04055 at 838.607 kb on + strand at 838.610 kb on - strand, within BWI76_RS04055 at 838.615 kb on - strand, within BWI76_RS04055 at 838.616 kb on - strand, within BWI76_RS04055 at 838.624 kb on - strand, within BWI76_RS04055 at 838.660 kb on - strand, within BWI76_RS04055 at 838.662 kb on + strand, within BWI76_RS04055 at 838.677 kb on + strand, within BWI76_RS04055 at 838.690 kb on + strand, within BWI76_RS04055 at 838.690 kb on + strand, within BWI76_RS04055 at 838.698 kb on - strand at 838.705 kb on - strand, within BWI76_RS04055 at 838.706 kb on - strand, within BWI76_RS04055 at 838.732 kb on - strand, within BWI76_RS04055 at 838.759 kb on + strand, within BWI76_RS04055 at 838.767 kb on - strand, within BWI76_RS04055 at 838.769 kb on + strand, within BWI76_RS04055 at 838.783 kb on - strand, within BWI76_RS04055 at 838.802 kb on + strand, within BWI76_RS04055 at 838.803 kb on + strand, within BWI76_RS04055 at 838.810 kb on - strand, within BWI76_RS04055 at 838.811 kb on - strand, within BWI76_RS04055 at 838.811 kb on - strand, within BWI76_RS04055 at 838.820 kb on + strand, within BWI76_RS04055 at 838.820 kb on + strand, within BWI76_RS04055 at 838.820 kb on + strand, within BWI76_RS04055 at 838.820 kb on + strand, within BWI76_RS04055 at 838.828 kb on - strand, within BWI76_RS04055 at 838.848 kb on - strand, within BWI76_RS04055 at 838.848 kb on - strand, within BWI76_RS04055 at 838.848 kb on - strand, within BWI76_RS04055 at 838.850 kb on + strand, within BWI76_RS04055 at 838.850 kb on + strand, within BWI76_RS04055 at 838.850 kb on + strand, within BWI76_RS04055 at 838.850 kb on + strand, within BWI76_RS04055 at 838.857 kb on - strand, within BWI76_RS04055 at 838.867 kb on - strand, within BWI76_RS04055 at 838.867 kb on - strand, within BWI76_RS04055 at 838.871 kb on + strand, within BWI76_RS04055 at 838.871 kb on - strand, within BWI76_RS04055 at 838.876 kb on + strand, within BWI76_RS04055 at 838.876 kb on - strand, within BWI76_RS04055 at 838.942 kb on + strand, within BWI76_RS04055 at 838.987 kb on + strand, within BWI76_RS04055 at 838.996 kb on + strand, within BWI76_RS04055 at 839.001 kb on + strand, within BWI76_RS04055 at 839.001 kb on + strand, within BWI76_RS04055 at 839.001 kb on + strand, within BWI76_RS04055 at 839.004 kb on - strand, within BWI76_RS04055 at 839.004 kb on - strand, within BWI76_RS04055 at 839.009 kb on - strand, within BWI76_RS04055 at 839.009 kb on - strand, within BWI76_RS04055 at 839.009 kb on - strand, within BWI76_RS04055 at 839.011 kb on + strand, within BWI76_RS04055 at 839.011 kb on + strand, within BWI76_RS04055 at 839.058 kb on + strand, within BWI76_RS04055 at 839.058 kb on + strand, within BWI76_RS04055 at 839.058 kb on + strand, within BWI76_RS04055 at 839.058 kb on + strand, within BWI76_RS04055 at 839.058 kb on + strand, within BWI76_RS04055 at 839.058 kb on + strand, within BWI76_RS04055 at 839.066 kb on + strand, within BWI76_RS04055 at 839.066 kb on + strand, within BWI76_RS04055 at 839.066 kb on + strand, within BWI76_RS04055 at 839.066 kb on + strand, within BWI76_RS04055 at 839.066 kb on - strand, within BWI76_RS04055 at 839.074 kb on - strand, within BWI76_RS04055 at 839.075 kb on + strand, within BWI76_RS04055 at 839.075 kb on + strand at 839.075 kb on + strand, within BWI76_RS04055 at 839.075 kb on + strand, within BWI76_RS04055 at 839.075 kb on - strand, within BWI76_RS04055 at 839.080 kb on + strand, within BWI76_RS04055 at 839.083 kb on - strand, within BWI76_RS04055 at 839.083 kb on - strand, within BWI76_RS04055 at 839.083 kb on - strand, within BWI76_RS04055 at 839.083 kb on - strand, within BWI76_RS04055 at 839.088 kb on - strand, within BWI76_RS04055 at 839.088 kb on - strand, within BWI76_RS04055 at 839.098 kb on - strand, within BWI76_RS04055 at 839.101 kb on + strand, within BWI76_RS04055 at 839.106 kb on + strand, within BWI76_RS04055 at 839.109 kb on - strand, within BWI76_RS04055 at 839.111 kb on + strand, within BWI76_RS04055 at 839.111 kb on + strand, within BWI76_RS04055 at 839.111 kb on + strand, within BWI76_RS04055 at 839.114 kb on - strand, within BWI76_RS04055 at 839.114 kb on - strand, within BWI76_RS04055 at 839.114 kb on - strand, within BWI76_RS04055 at 839.114 kb on - strand, within BWI76_RS04055 at 839.116 kb on + strand, within BWI76_RS04055 at 839.116 kb on + strand, within BWI76_RS04055 at 839.116 kb on + strand, within BWI76_RS04055 at 839.116 kb on + strand, within BWI76_RS04055 at 839.116 kb on + strand, within BWI76_RS04055 at 839.116 kb on + strand, within BWI76_RS04055 at 839.116 kb on + strand, within BWI76_RS04055 at 839.116 kb on + strand, within BWI76_RS04055 at 839.116 kb on + strand, within BWI76_RS04055 at 839.116 kb on + strand, within BWI76_RS04055 at 839.116 kb on + strand, within BWI76_RS04055 at 839.119 kb on - strand at 839.119 kb on - strand, within BWI76_RS04055 at 839.124 kb on - strand, within BWI76_RS04055 at 839.124 kb on - strand, within BWI76_RS04055 at 839.124 kb on - strand, within BWI76_RS04055 at 839.124 kb on - strand, within BWI76_RS04055 at 839.124 kb on - strand, within BWI76_RS04055 at 839.124 kb on - strand, within BWI76_RS04055 at 839.124 kb on - strand, within BWI76_RS04055 at 839.124 kb on - strand, within BWI76_RS04055 at 839.124 kb on - strand, within BWI76_RS04055 at 839.124 kb on - strand, within BWI76_RS04055 at 839.124 kb on - strand, within BWI76_RS04055 at 839.124 kb on - strand, within BWI76_RS04055 at 839.124 kb on - strand, within BWI76_RS04055 at 839.124 kb on - strand, within BWI76_RS04055 at 839.124 kb on - strand, within BWI76_RS04055 at 839.130 kb on + strand, within BWI76_RS04055 at 839.138 kb on - strand, within BWI76_RS04055 at 839.138 kb on - strand, within BWI76_RS04055 at 839.140 kb on - strand, within BWI76_RS04055 at 839.141 kb on - strand, within BWI76_RS04055 at 839.145 kb on - strand at 839.145 kb on - strand at 839.163 kb on + strand at 839.172 kb on + strand at 839.172 kb on + strand at 839.218 kb on + strand at 839.228 kb on - strand at 839.229 kb on + strand at 839.229 kb on + strand at 839.229 kb on + strand at 839.229 kb on + strand at 839.229 kb on + strand at 839.229 kb on + strand at 839.229 kb on + strand at 839.234 kb on + strand at 839.236 kb on - strand at 839.237 kb on - strand at 839.237 kb on - strand at 839.237 kb on - strand at 839.237 kb on - strand at 839.237 kb on - strand at 839.237 kb on - strand at 839.237 kb on - strand at 839.239 kb on + strand at 839.239 kb on + strand at 839.239 kb on + strand at 839.244 kb on + strand at 839.248 kb on + strand at 839.253 kb on + strand at 839.289 kb on - strand at 839.292 kb on + strand at 839.386 kb on + strand at 839.398 kb on + strand at 839.422 kb on + strand at 839.422 kb on + strand at 839.422 kb on + strand at 839.422 kb on + strand at 839.430 kb on - strand at 839.430 kb on - strand at 839.430 kb on - strand at 839.531 kb on - strand at 839.555 kb on - strand, within BWI76_RS04060 at 839.638 kb on - strand, within BWI76_RS04060 at 839.697 kb on + strand, within BWI76_RS04060 at 840.292 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C) remove 838,534 + BWI76_RS04055 0.32 -0.9 838,535 + BWI76_RS04055 0.32 -0.3 838,605 - BWI76_RS04055 0.38 +0.9 838,605 - BWI76_RS04055 0.38 -0.3 838,607 + BWI76_RS04055 0.39 +0.3 838,607 + +0.1 838,610 - BWI76_RS04055 0.39 +0.4 838,615 - BWI76_RS04055 0.39 +2.1 838,616 - BWI76_RS04055 0.40 -0.8 838,624 - BWI76_RS04055 0.40 +0.5 838,660 - BWI76_RS04055 0.44 +1.1 838,662 + BWI76_RS04055 0.44 +2.8 838,677 + BWI76_RS04055 0.45 +1.1 838,690 + BWI76_RS04055 0.47 +0.8 838,690 + BWI76_RS04055 0.47 -0.3 838,698 - +0.1 838,705 - BWI76_RS04055 0.48 +0.6 838,706 - BWI76_RS04055 0.48 -0.4 838,732 - BWI76_RS04055 0.51 +1.2 838,759 + BWI76_RS04055 0.53 -0.5 838,767 - BWI76_RS04055 0.54 +1.7 838,769 + BWI76_RS04055 0.54 +0.1 838,783 - BWI76_RS04055 0.55 -1.4 838,802 + BWI76_RS04055 0.57 +0.7 838,803 + BWI76_RS04055 0.57 +0.0 838,810 - BWI76_RS04055 0.58 -0.9 838,811 - BWI76_RS04055 0.58 +0.4 838,811 - BWI76_RS04055 0.58 +0.1 838,820 + BWI76_RS04055 0.59 -4.2 838,820 + BWI76_RS04055 0.59 +1.0 838,820 + BWI76_RS04055 0.59 +0.5 838,820 + BWI76_RS04055 0.59 +0.1 838,828 - BWI76_RS04055 0.60 +0.0 838,848 - BWI76_RS04055 0.62 +2.1 838,848 - BWI76_RS04055 0.62 -2.8 838,848 - BWI76_RS04055 0.62 +1.4 838,850 + BWI76_RS04055 0.62 +1.5 838,850 + BWI76_RS04055 0.62 +0.6 838,850 + BWI76_RS04055 0.62 -0.4 838,850 + BWI76_RS04055 0.62 +0.4 838,857 - BWI76_RS04055 0.63 +0.2 838,867 - BWI76_RS04055 0.64 -1.7 838,867 - BWI76_RS04055 0.64 -1.2 838,871 + BWI76_RS04055 0.64 -0.4 838,871 - BWI76_RS04055 0.64 +0.0 838,876 + BWI76_RS04055 0.64 +2.5 838,876 - BWI76_RS04055 0.64 +0.5 838,942 + BWI76_RS04055 0.71 -1.0 838,987 + BWI76_RS04055 0.75 +0.5 838,996 + BWI76_RS04055 0.76 +4.1 839,001 + BWI76_RS04055 0.76 +1.1 839,001 + BWI76_RS04055 0.76 +1.7 839,001 + BWI76_RS04055 0.76 +2.2 839,004 - BWI76_RS04055 0.77 -1.2 839,004 - BWI76_RS04055 0.77 +0.4 839,009 - BWI76_RS04055 0.77 -0.1 839,009 - BWI76_RS04055 0.77 -1.2 839,009 - BWI76_RS04055 0.77 +0.1 839,011 + BWI76_RS04055 0.77 +0.6 839,011 + BWI76_RS04055 0.77 +1.5 839,058 + BWI76_RS04055 0.82 -0.2 839,058 + BWI76_RS04055 0.82 -0.7 839,058 + BWI76_RS04055 0.82 +0.5 839,058 + BWI76_RS04055 0.82 -0.1 839,058 + BWI76_RS04055 0.82 -0.9 839,058 + BWI76_RS04055 0.82 -0.5 839,066 + BWI76_RS04055 0.83 -1.5 839,066 + BWI76_RS04055 0.83 +0.1 839,066 + BWI76_RS04055 0.83 -0.4 839,066 + BWI76_RS04055 0.83 +0.3 839,066 - BWI76_RS04055 0.83 +2.1 839,074 - BWI76_RS04055 0.83 +1.4 839,075 + BWI76_RS04055 0.83 -0.4 839,075 + +0.1 839,075 + BWI76_RS04055 0.83 +0.1 839,075 + BWI76_RS04055 0.83 -0.8 839,075 - BWI76_RS04055 0.83 -2.4 839,080 + BWI76_RS04055 0.84 +1.0 839,083 - BWI76_RS04055 0.84 +0.1 839,083 - BWI76_RS04055 0.84 -2.9 839,083 - BWI76_RS04055 0.84 -1.7 839,083 - BWI76_RS04055 0.84 -1.9 839,088 - BWI76_RS04055 0.85 -0.0 839,088 - BWI76_RS04055 0.85 -2.4 839,098 - BWI76_RS04055 0.86 -0.1 839,101 + BWI76_RS04055 0.86 +0.1 839,106 + BWI76_RS04055 0.86 +0.6 839,109 - BWI76_RS04055 0.87 -0.1 839,111 + BWI76_RS04055 0.87 -0.8 839,111 + BWI76_RS04055 0.87 +1.4 839,111 + BWI76_RS04055 0.87 -2.1 839,114 - BWI76_RS04055 0.87 +1.1 839,114 - BWI76_RS04055 0.87 +0.2 839,114 - BWI76_RS04055 0.87 +0.3 839,114 - BWI76_RS04055 0.87 -0.0 839,116 + BWI76_RS04055 0.87 -2.8 839,116 + BWI76_RS04055 0.87 +1.1 839,116 + BWI76_RS04055 0.87 +2.4 839,116 + BWI76_RS04055 0.87 +0.3 839,116 + BWI76_RS04055 0.87 -0.3 839,116 + BWI76_RS04055 0.87 -0.3 839,116 + BWI76_RS04055 0.87 -0.4 839,116 + BWI76_RS04055 0.87 +0.7 839,116 + BWI76_RS04055 0.87 -2.7 839,116 + BWI76_RS04055 0.87 +0.4 839,116 + BWI76_RS04055 0.87 -0.2 839,119 - +1.1 839,119 - BWI76_RS04055 0.88 +0.1 839,124 - BWI76_RS04055 0.88 -2.3 839,124 - BWI76_RS04055 0.88 +1.4 839,124 - BWI76_RS04055 0.88 -0.4 839,124 - BWI76_RS04055 0.88 +0.7 839,124 - BWI76_RS04055 0.88 +0.7 839,124 - BWI76_RS04055 0.88 -0.5 839,124 - BWI76_RS04055 0.88 -1.6 839,124 - BWI76_RS04055 0.88 -2.4 839,124 - BWI76_RS04055 0.88 +0.7 839,124 - BWI76_RS04055 0.88 +0.6 839,124 - BWI76_RS04055 0.88 -0.9 839,124 - BWI76_RS04055 0.88 +2.7 839,124 - BWI76_RS04055 0.88 +0.2 839,124 - BWI76_RS04055 0.88 +1.1 839,124 - BWI76_RS04055 0.88 +0.9 839,130 + BWI76_RS04055 0.89 +0.3 839,138 - BWI76_RS04055 0.89 +1.0 839,138 - BWI76_RS04055 0.89 -1.2 839,140 - BWI76_RS04055 0.90 +2.5 839,141 - BWI76_RS04055 0.90 -0.2 839,145 - +0.9 839,145 - -0.4 839,163 + +0.0 839,172 + -0.9 839,172 + +0.9 839,218 + +0.4 839,228 - -2.2 839,229 + -0.3 839,229 + +1.2 839,229 + -3.9 839,229 + +0.4 839,229 + -0.4 839,229 + -0.0 839,229 + -0.7 839,234 + +0.2 839,236 - +1.1 839,237 - -2.6 839,237 - -1.2 839,237 - -1.4 839,237 - -1.0 839,237 - +0.4 839,237 - +0.5 839,237 - -2.6 839,239 + -0.4 839,239 + +2.1 839,239 + +0.3 839,244 + +0.9 839,248 + -1.9 839,253 + +0.7 839,289 - +1.0 839,292 + -0.6 839,386 + +0.6 839,398 + +0.7 839,422 + -0.9 839,422 + +0.1 839,422 + +2.0 839,422 + +0.6 839,430 - +1.1 839,430 - -1.7 839,430 - +0.3 839,531 - +0.0 839,555 - BWI76_RS04060 0.18 +0.3 839,638 - BWI76_RS04060 0.53 +2.0 839,697 + BWI76_RS04060 0.78 +1.4 840,292 - +0.1
Or see this region's nucleotide sequence