Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS03800

Experiment: 2-Deoxyadenosine 4 mM (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntBWI76_RS03795 and BWI76_RS03800 are separated by 45 nucleotidesBWI76_RS03800 and BWI76_RS03805 overlap by 1 nucleotidesBWI76_RS03805 and BWI76_RS03810 are separated by 349 nucleotides BWI76_RS03795: BWI76_RS03795 - putative aldehyde dehydrogenase, at 785,001 to 786,371 _RS03795 BWI76_RS03800: BWI76_RS03800 - hypothetical protein, at 786,417 to 786,737 _RS03800 BWI76_RS03805: BWI76_RS03805 - porin, at 786,737 to 787,282 _RS03805 BWI76_RS03810: BWI76_RS03810 - GTPase, at 787,632 to 788,588 _RS03810 Position (kb) 786 787Strain fitness (log2 ratio) -2 -1 0 1 2at 785.468 kb on + strand, within BWI76_RS03795at 785.610 kb on + strand, within BWI76_RS03795at 785.610 kb on + strand, within BWI76_RS03795at 785.618 kb on - strand, within BWI76_RS03795at 785.664 kb on - strand, within BWI76_RS03795at 785.720 kb on - strand, within BWI76_RS03795at 785.778 kb on + strand, within BWI76_RS03795at 785.791 kb on - strand, within BWI76_RS03795at 785.811 kb on - strand, within BWI76_RS03795at 785.951 kb on + strand, within BWI76_RS03795at 785.951 kb on + strand, within BWI76_RS03795at 786.054 kb on - strand, within BWI76_RS03795at 786.070 kb on + strand, within BWI76_RS03795at 786.101 kb on + strand, within BWI76_RS03795at 786.171 kb on + strand, within BWI76_RS03795at 786.233 kb on + strand, within BWI76_RS03795at 786.247 kb on + strandat 786.270 kb on - strandat 786.574 kb on + strand, within BWI76_RS03800at 786.582 kb on - strand, within BWI76_RS03800at 786.768 kb on - strandat 786.905 kb on + strand, within BWI76_RS03805at 786.924 kb on + strand, within BWI76_RS03805at 786.936 kb on + strand, within BWI76_RS03805at 786.937 kb on - strand, within BWI76_RS03805at 787.215 kb on + strand, within BWI76_RS03805at 787.244 kb on + strandat 787.252 kb on - strandat 787.259 kb on - strandat 787.292 kb on - strandat 787.369 kb on - strandat 787.437 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C)
remove
785,468 + BWI76_RS03795 0.34 -0.2
785,610 + BWI76_RS03795 0.44 +0.4
785,610 + BWI76_RS03795 0.44 +0.5
785,618 - BWI76_RS03795 0.45 -2.3
785,664 - BWI76_RS03795 0.48 +0.9
785,720 - BWI76_RS03795 0.52 +0.3
785,778 + BWI76_RS03795 0.57 -0.5
785,791 - BWI76_RS03795 0.58 +0.1
785,811 - BWI76_RS03795 0.59 +0.4
785,951 + BWI76_RS03795 0.69 +0.4
785,951 + BWI76_RS03795 0.69 +1.1
786,054 - BWI76_RS03795 0.77 -0.4
786,070 + BWI76_RS03795 0.78 +0.9
786,101 + BWI76_RS03795 0.80 -0.5
786,171 + BWI76_RS03795 0.85 +0.5
786,233 + BWI76_RS03795 0.90 +0.8
786,247 + +2.5
786,270 - +1.0
786,574 + BWI76_RS03800 0.49 +2.3
786,582 - BWI76_RS03800 0.51 +0.9
786,768 - +0.0
786,905 + BWI76_RS03805 0.31 +0.3
786,924 + BWI76_RS03805 0.34 +0.0
786,936 + BWI76_RS03805 0.36 +0.4
786,937 - BWI76_RS03805 0.37 +0.0
787,215 + BWI76_RS03805 0.88 -2.6
787,244 + +0.6
787,252 - +1.2
787,259 - +1.6
787,292 - -0.9
787,369 - +0.1
787,437 - -1.4

Or see this region's nucleotide sequence