Experiment: KB with Peucenin 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4698 and Psyr_4699 are separated by 197 nucleotides Psyr_4699 and Psyr_4700 are separated by 322 nucleotides
Psyr_4698: Psyr_4698 - RarD protein, at 5,567,144 to 5,568,031
_4698
Psyr_4699: Psyr_4699 - Amino acid-binding ACT, at 5,568,229 to 5,568,771
_4699
Psyr_4700: Psyr_4700 - malate synthase, at 5,569,094 to 5,571,271
_4700
Position (kb) 5568
5569 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5567.411 kb on + strand, within Psyr_4698 at 5567.411 kb on + strand, within Psyr_4698 at 5567.411 kb on + strand, within Psyr_4698 at 5567.411 kb on + strand, within Psyr_4698 at 5567.411 kb on + strand, within Psyr_4698 at 5567.411 kb on + strand, within Psyr_4698 at 5567.411 kb on + strand, within Psyr_4698 at 5567.411 kb on + strand, within Psyr_4698 at 5567.411 kb on + strand, within Psyr_4698 at 5567.411 kb on + strand, within Psyr_4698 at 5567.412 kb on - strand, within Psyr_4698 at 5567.412 kb on - strand, within Psyr_4698 at 5567.412 kb on - strand, within Psyr_4698 at 5567.412 kb on - strand, within Psyr_4698 at 5567.412 kb on - strand, within Psyr_4698 at 5567.412 kb on - strand, within Psyr_4698 at 5567.412 kb on - strand, within Psyr_4698 at 5567.412 kb on - strand, within Psyr_4698 at 5567.412 kb on - strand, within Psyr_4698 at 5567.412 kb on - strand, within Psyr_4698 at 5567.462 kb on + strand, within Psyr_4698 at 5567.462 kb on + strand, within Psyr_4698 at 5567.462 kb on + strand, within Psyr_4698 at 5567.462 kb on + strand, within Psyr_4698 at 5567.462 kb on + strand, within Psyr_4698 at 5567.462 kb on + strand, within Psyr_4698 at 5567.462 kb on + strand, within Psyr_4698 at 5567.462 kb on + strand, within Psyr_4698 at 5567.462 kb on + strand, within Psyr_4698 at 5567.462 kb on + strand, within Psyr_4698 at 5567.462 kb on + strand, within Psyr_4698 at 5567.462 kb on + strand, within Psyr_4698 at 5567.463 kb on - strand, within Psyr_4698 at 5567.463 kb on - strand, within Psyr_4698 at 5567.463 kb on - strand, within Psyr_4698 at 5567.463 kb on - strand, within Psyr_4698 at 5567.463 kb on - strand, within Psyr_4698 at 5567.463 kb on - strand, within Psyr_4698 at 5567.463 kb on - strand, within Psyr_4698 at 5567.503 kb on - strand, within Psyr_4698 at 5567.503 kb on - strand, within Psyr_4698 at 5567.633 kb on + strand, within Psyr_4698 at 5567.882 kb on + strand, within Psyr_4698 at 5567.882 kb on + strand, within Psyr_4698 at 5567.882 kb on + strand, within Psyr_4698 at 5567.882 kb on + strand, within Psyr_4698 at 5567.882 kb on + strand, within Psyr_4698 at 5567.882 kb on + strand, within Psyr_4698 at 5567.882 kb on + strand, within Psyr_4698 at 5567.883 kb on - strand, within Psyr_4698 at 5567.883 kb on - strand, within Psyr_4698 at 5567.924 kb on + strand, within Psyr_4698 at 5567.925 kb on - strand, within Psyr_4698 at 5567.925 kb on - strand, within Psyr_4698 at 5567.925 kb on - strand, within Psyr_4698 at 5567.990 kb on + strand at 5567.990 kb on + strand at 5567.990 kb on + strand at 5567.990 kb on + strand at 5567.990 kb on + strand at 5567.990 kb on + strand at 5567.990 kb on + strand at 5567.990 kb on + strand at 5567.990 kb on + strand at 5567.991 kb on - strand at 5567.991 kb on - strand at 5567.991 kb on - strand at 5567.991 kb on - strand at 5568.049 kb on - strand at 5568.117 kb on + strand at 5568.117 kb on + strand at 5568.118 kb on - strand at 5568.195 kb on + strand at 5568.196 kb on - strand at 5568.196 kb on - strand at 5568.196 kb on - strand at 5568.196 kb on - strand at 5568.231 kb on - strand at 5568.376 kb on + strand, within Psyr_4699 at 5568.376 kb on + strand, within Psyr_4699 at 5568.376 kb on + strand, within Psyr_4699 at 5568.376 kb on + strand, within Psyr_4699 at 5568.376 kb on + strand, within Psyr_4699 at 5568.377 kb on - strand, within Psyr_4699 at 5568.377 kb on - strand, within Psyr_4699 at 5568.377 kb on - strand, within Psyr_4699 at 5568.377 kb on - strand, within Psyr_4699 at 5568.377 kb on - strand, within Psyr_4699 at 5568.755 kb on - strand at 5568.801 kb on - strand at 5568.801 kb on - strand at 5568.819 kb on + strand at 5568.819 kb on + strand at 5568.820 kb on - strand at 5568.825 kb on + strand at 5568.826 kb on - strand at 5568.827 kb on + strand at 5568.827 kb on + strand at 5568.827 kb on + strand at 5568.827 kb on + strand at 5568.827 kb on + strand at 5568.827 kb on + strand at 5568.827 kb on + strand at 5568.827 kb on + strand at 5568.827 kb on + strand at 5568.827 kb on + strand at 5568.827 kb on + strand at 5568.827 kb on + strand at 5568.827 kb on + strand at 5568.827 kb on + strand at 5568.828 kb on - strand at 5568.828 kb on - strand at 5568.828 kb on - strand at 5568.828 kb on - strand at 5568.828 kb on - strand at 5568.867 kb on + strand at 5568.884 kb on + strand at 5568.922 kb on + strand at 5568.964 kb on + strand at 5568.964 kb on + strand at 5568.964 kb on + strand at 5568.999 kb on + strand at 5568.999 kb on + strand at 5568.999 kb on + strand at 5568.999 kb on + strand at 5568.999 kb on + strand at 5568.999 kb on + strand at 5568.999 kb on + strand at 5568.999 kb on + strand at 5568.999 kb on + strand at 5568.999 kb on + strand at 5569.000 kb on - strand at 5569.000 kb on - strand at 5569.000 kb on - strand at 5569.000 kb on - strand at 5569.000 kb on - strand at 5569.000 kb on - strand at 5569.000 kb on - strand at 5569.000 kb on - strand at 5569.000 kb on - strand at 5569.000 kb on - strand at 5569.000 kb on - strand at 5569.000 kb on - strand at 5569.019 kb on + strand at 5569.019 kb on + strand at 5569.019 kb on + strand at 5569.019 kb on + strand at 5569.019 kb on + strand at 5569.020 kb on - strand at 5569.020 kb on - strand at 5569.038 kb on + strand at 5569.038 kb on + strand at 5569.039 kb on - strand at 5569.103 kb on + strand at 5569.103 kb on + strand at 5569.103 kb on + strand at 5569.103 kb on + strand at 5569.104 kb on - strand at 5569.272 kb on + strand at 5569.272 kb on + strand at 5569.272 kb on + strand at 5569.272 kb on + strand at 5569.273 kb on - strand at 5569.334 kb on + strand, within Psyr_4700 at 5569.335 kb on - strand, within Psyr_4700 at 5569.508 kb on + strand, within Psyr_4700 at 5569.508 kb on + strand, within Psyr_4700 at 5569.509 kb on - strand, within Psyr_4700 at 5569.509 kb on - strand, within Psyr_4700 at 5569.509 kb on - strand, within Psyr_4700 at 5569.571 kb on + strand, within Psyr_4700 at 5569.571 kb on + strand, within Psyr_4700 at 5569.572 kb on - strand, within Psyr_4700 at 5569.572 kb on - strand, within Psyr_4700 at 5569.573 kb on + strand, within Psyr_4700 at 5569.670 kb on + strand, within Psyr_4700 at 5569.670 kb on + strand, within Psyr_4700 at 5569.670 kb on + strand, within Psyr_4700 at 5569.670 kb on + strand, within Psyr_4700 at 5569.670 kb on + strand, within Psyr_4700 at 5569.670 kb on + strand, within Psyr_4700 at 5569.670 kb on + strand, within Psyr_4700 at 5569.670 kb on + strand, within Psyr_4700 at 5569.670 kb on + strand, within Psyr_4700 at 5569.670 kb on + strand, within Psyr_4700 at 5569.670 kb on + strand, within Psyr_4700 at 5569.670 kb on + strand, within Psyr_4700 at 5569.670 kb on + strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.672 kb on + strand, within Psyr_4700 at 5569.672 kb on + strand, within Psyr_4700 at 5569.672 kb on + strand, within Psyr_4700 at 5569.672 kb on + strand, within Psyr_4700 at 5569.672 kb on + strand, within Psyr_4700 at 5569.672 kb on + strand, within Psyr_4700 at 5569.672 kb on + strand, within Psyr_4700 at 5569.673 kb on - strand, within Psyr_4700 at 5569.673 kb on - strand, within Psyr_4700 at 5569.673 kb on - strand, within Psyr_4700 at 5569.673 kb on - strand, within Psyr_4700 at 5569.673 kb on - strand, within Psyr_4700 at 5569.673 kb on - strand, within Psyr_4700 at 5569.673 kb on - strand, within Psyr_4700 at 5569.673 kb on - strand, within Psyr_4700 at 5569.673 kb on - strand, within Psyr_4700 at 5569.721 kb on - strand, within Psyr_4700
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Peucenin 10 mM remove 5,567,411 + Psyr_4698 0.30 -0.8 5,567,411 + Psyr_4698 0.30 +0.7 5,567,411 + Psyr_4698 0.30 -0.4 5,567,411 + Psyr_4698 0.30 +0.7 5,567,411 + Psyr_4698 0.30 +0.9 5,567,411 + Psyr_4698 0.30 +0.2 5,567,411 + Psyr_4698 0.30 -0.6 5,567,411 + Psyr_4698 0.30 +0.4 5,567,411 + Psyr_4698 0.30 -0.0 5,567,411 + Psyr_4698 0.30 +0.8 5,567,412 - Psyr_4698 0.30 -1.4 5,567,412 - Psyr_4698 0.30 +0.5 5,567,412 - Psyr_4698 0.30 +0.4 5,567,412 - Psyr_4698 0.30 -1.0 5,567,412 - Psyr_4698 0.30 +0.8 5,567,412 - Psyr_4698 0.30 -1.0 5,567,412 - Psyr_4698 0.30 -0.2 5,567,412 - Psyr_4698 0.30 +0.8 5,567,412 - Psyr_4698 0.30 +0.5 5,567,412 - Psyr_4698 0.30 -1.2 5,567,462 + Psyr_4698 0.36 -0.2 5,567,462 + Psyr_4698 0.36 +0.6 5,567,462 + Psyr_4698 0.36 +0.3 5,567,462 + Psyr_4698 0.36 +0.2 5,567,462 + Psyr_4698 0.36 -1.9 5,567,462 + Psyr_4698 0.36 +2.4 5,567,462 + Psyr_4698 0.36 -0.5 5,567,462 + Psyr_4698 0.36 -1.2 5,567,462 + Psyr_4698 0.36 +1.1 5,567,462 + Psyr_4698 0.36 +0.1 5,567,462 + Psyr_4698 0.36 -1.4 5,567,462 + Psyr_4698 0.36 +1.0 5,567,463 - Psyr_4698 0.36 +0.6 5,567,463 - Psyr_4698 0.36 -0.3 5,567,463 - Psyr_4698 0.36 -0.1 5,567,463 - Psyr_4698 0.36 -0.9 5,567,463 - Psyr_4698 0.36 +0.5 5,567,463 - Psyr_4698 0.36 +0.2 5,567,463 - Psyr_4698 0.36 -0.8 5,567,503 - Psyr_4698 0.40 -0.6 5,567,503 - Psyr_4698 0.40 -1.9 5,567,633 + Psyr_4698 0.55 +1.0 5,567,882 + Psyr_4698 0.83 -1.0 5,567,882 + Psyr_4698 0.83 -0.4 5,567,882 + Psyr_4698 0.83 -0.2 5,567,882 + Psyr_4698 0.83 -0.3 5,567,882 + Psyr_4698 0.83 -0.4 5,567,882 + Psyr_4698 0.83 -0.7 5,567,882 + Psyr_4698 0.83 +0.4 5,567,883 - Psyr_4698 0.83 -0.6 5,567,883 - Psyr_4698 0.83 -0.2 5,567,924 + Psyr_4698 0.88 -0.4 5,567,925 - Psyr_4698 0.88 +0.3 5,567,925 - Psyr_4698 0.88 -0.2 5,567,925 - Psyr_4698 0.88 +0.6 5,567,990 + +1.4 5,567,990 + -0.7 5,567,990 + +0.0 5,567,990 + +0.4 5,567,990 + -0.6 5,567,990 + -0.6 5,567,990 + -0.6 5,567,990 + -0.2 5,567,990 + +0.2 5,567,991 - -0.5 5,567,991 - -0.9 5,567,991 - +0.3 5,567,991 - +0.2 5,568,049 - +0.4 5,568,117 + -2.2 5,568,117 + -1.3 5,568,118 - +0.0 5,568,195 + +1.4 5,568,196 - +0.2 5,568,196 - +0.0 5,568,196 - +0.8 5,568,196 - -0.2 5,568,231 - -0.3 5,568,376 + Psyr_4699 0.27 -0.8 5,568,376 + Psyr_4699 0.27 -0.2 5,568,376 + Psyr_4699 0.27 -1.0 5,568,376 + Psyr_4699 0.27 -0.9 5,568,376 + Psyr_4699 0.27 -0.1 5,568,377 - Psyr_4699 0.27 -0.9 5,568,377 - Psyr_4699 0.27 -1.0 5,568,377 - Psyr_4699 0.27 -0.7 5,568,377 - Psyr_4699 0.27 +0.5 5,568,377 - Psyr_4699 0.27 -0.8 5,568,755 - +0.1 5,568,801 - +0.9 5,568,801 - -0.8 5,568,819 + -0.1 5,568,819 + +0.2 5,568,820 - -0.0 5,568,825 + +0.1 5,568,826 - -2.2 5,568,827 + +1.0 5,568,827 + +0.4 5,568,827 + +0.4 5,568,827 + +0.8 5,568,827 + -1.4 5,568,827 + -0.4 5,568,827 + -0.1 5,568,827 + -0.0 5,568,827 + +0.0 5,568,827 + +0.1 5,568,827 + +0.9 5,568,827 + -0.5 5,568,827 + +0.0 5,568,827 + +1.0 5,568,828 - -0.6 5,568,828 - +0.5 5,568,828 - +0.2 5,568,828 - -0.8 5,568,828 - -0.1 5,568,867 + +0.0 5,568,884 + +0.3 5,568,922 + -1.0 5,568,964 + +0.4 5,568,964 + +1.0 5,568,964 + -0.1 5,568,999 + +0.5 5,568,999 + +0.8 5,568,999 + +1.4 5,568,999 + -1.6 5,568,999 + +0.6 5,568,999 + -0.4 5,568,999 + +0.6 5,568,999 + -0.6 5,568,999 + -2.2 5,568,999 + +0.0 5,569,000 - -0.8 5,569,000 - -0.1 5,569,000 - -0.8 5,569,000 - -0.2 5,569,000 - -0.1 5,569,000 - +0.2 5,569,000 - +1.1 5,569,000 - +1.5 5,569,000 - +0.8 5,569,000 - +0.8 5,569,000 - +0.0 5,569,000 - -1.4 5,569,019 + +0.1 5,569,019 + -1.4 5,569,019 + -0.1 5,569,019 + -1.5 5,569,019 + +0.6 5,569,020 - +0.1 5,569,020 - +0.2 5,569,038 + +1.4 5,569,038 + -0.7 5,569,039 - +0.0 5,569,103 + +1.1 5,569,103 + -0.1 5,569,103 + -0.6 5,569,103 + -0.3 5,569,104 - +0.3 5,569,272 + +0.4 5,569,272 + +1.4 5,569,272 + -0.1 5,569,272 + +0.4 5,569,273 - -0.1 5,569,334 + Psyr_4700 0.11 +0.7 5,569,335 - Psyr_4700 0.11 +1.4 5,569,508 + Psyr_4700 0.19 -1.9 5,569,508 + Psyr_4700 0.19 -0.6 5,569,509 - Psyr_4700 0.19 -0.4 5,569,509 - Psyr_4700 0.19 -0.5 5,569,509 - Psyr_4700 0.19 +0.5 5,569,571 + Psyr_4700 0.22 -0.1 5,569,571 + Psyr_4700 0.22 -0.1 5,569,572 - Psyr_4700 0.22 +0.6 5,569,572 - Psyr_4700 0.22 -0.7 5,569,573 + Psyr_4700 0.22 +0.0 5,569,670 + Psyr_4700 0.26 +0.1 5,569,670 + Psyr_4700 0.26 -0.6 5,569,670 + Psyr_4700 0.26 -1.0 5,569,670 + Psyr_4700 0.26 -0.2 5,569,670 + Psyr_4700 0.26 +0.1 5,569,670 + Psyr_4700 0.26 +0.4 5,569,670 + Psyr_4700 0.26 -0.1 5,569,670 + Psyr_4700 0.26 -0.4 5,569,670 + Psyr_4700 0.26 -0.2 5,569,670 + Psyr_4700 0.26 -1.1 5,569,670 + Psyr_4700 0.26 -0.7 5,569,670 + Psyr_4700 0.26 -0.6 5,569,670 + Psyr_4700 0.26 +0.8 5,569,671 - Psyr_4700 0.26 +0.4 5,569,671 - Psyr_4700 0.26 -0.5 5,569,671 - Psyr_4700 0.26 -0.4 5,569,671 - Psyr_4700 0.26 +0.5 5,569,671 - Psyr_4700 0.26 -0.3 5,569,671 - Psyr_4700 0.26 -0.2 5,569,671 - Psyr_4700 0.26 -2.0 5,569,671 - Psyr_4700 0.26 +0.8 5,569,671 - Psyr_4700 0.26 +0.9 5,569,671 - Psyr_4700 0.26 +1.1 5,569,671 - Psyr_4700 0.26 +0.7 5,569,671 - Psyr_4700 0.26 -1.0 5,569,671 - Psyr_4700 0.26 +0.4 5,569,671 - Psyr_4700 0.26 -3.1 5,569,672 + Psyr_4700 0.27 -2.6 5,569,672 + Psyr_4700 0.27 -0.6 5,569,672 + Psyr_4700 0.27 +0.1 5,569,672 + Psyr_4700 0.27 -0.6 5,569,672 + Psyr_4700 0.27 -0.2 5,569,672 + Psyr_4700 0.27 +0.4 5,569,672 + Psyr_4700 0.27 -0.6 5,569,673 - Psyr_4700 0.27 -1.2 5,569,673 - Psyr_4700 0.27 -0.1 5,569,673 - Psyr_4700 0.27 +1.2 5,569,673 - Psyr_4700 0.27 -0.8 5,569,673 - Psyr_4700 0.27 -0.2 5,569,673 - Psyr_4700 0.27 +0.1 5,569,673 - Psyr_4700 0.27 +0.2 5,569,673 - Psyr_4700 0.27 -0.9 5,569,673 - Psyr_4700 0.27 -0.6 5,569,721 - Psyr_4700 0.29 +1.0
Or see this region's nucleotide sequence