Experiment: 2'-Deoxycytidine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS25230 and BWI76_RS25235 are separated by 209 nucleotides BWI76_RS25235 and BWI76_RS25240 are separated by 14 nucleotides
BWI76_RS25230: BWI76_RS25230 - phospholipid ABC transporter ATP-binding protein MlaF, at 5,246,400 to 5,247,212
_RS25230
BWI76_RS25235: BWI76_RS25235 - calcium/sodium antiporter, at 5,247,422 to 5,248,399
_RS25235
BWI76_RS25240: BWI76_RS25240 - D-arabinose 5-phosphate isomerase, at 5,248,414 to 5,249,400
_RS25240
Position (kb) 5247
5248
5249 Strain fitness (log2 ratio) -1
0
1
2 at 5246.538 kb on - strand, within BWI76_RS25230 at 5246.629 kb on + strand, within BWI76_RS25230 at 5246.740 kb on + strand, within BWI76_RS25230 at 5246.845 kb on - strand, within BWI76_RS25230 at 5246.909 kb on + strand, within BWI76_RS25230 at 5246.947 kb on - strand, within BWI76_RS25230 at 5246.968 kb on + strand, within BWI76_RS25230 at 5246.976 kb on - strand, within BWI76_RS25230 at 5246.976 kb on - strand, within BWI76_RS25230 at 5246.976 kb on - strand, within BWI76_RS25230 at 5247.247 kb on - strand at 5247.379 kb on - strand at 5247.432 kb on - strand at 5247.487 kb on + strand at 5247.487 kb on + strand at 5247.487 kb on + strand at 5247.487 kb on + strand at 5247.553 kb on + strand, within BWI76_RS25235 at 5247.605 kb on - strand, within BWI76_RS25235 at 5247.633 kb on + strand, within BWI76_RS25235 at 5247.699 kb on - strand, within BWI76_RS25235 at 5247.883 kb on - strand, within BWI76_RS25235 at 5247.883 kb on - strand at 5247.998 kb on + strand, within BWI76_RS25235 at 5248.166 kb on + strand, within BWI76_RS25235 at 5248.283 kb on + strand, within BWI76_RS25235 at 5248.369 kb on + strand at 5248.369 kb on + strand at 5248.377 kb on - strand at 5248.409 kb on + strand at 5248.489 kb on + strand at 5248.489 kb on + strand at 5248.694 kb on - strand, within BWI76_RS25240 at 5248.730 kb on - strand, within BWI76_RS25240 at 5248.858 kb on - strand, within BWI76_RS25240 at 5248.882 kb on + strand, within BWI76_RS25240 at 5248.907 kb on - strand, within BWI76_RS25240 at 5248.917 kb on + strand, within BWI76_RS25240 at 5249.215 kb on - strand, within BWI76_RS25240 at 5249.395 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxycytidine 5 mM (C) remove 5,246,538 - BWI76_RS25230 0.17 +0.0 5,246,629 + BWI76_RS25230 0.28 +1.0 5,246,740 + BWI76_RS25230 0.42 +0.3 5,246,845 - BWI76_RS25230 0.55 +0.0 5,246,909 + BWI76_RS25230 0.63 -0.1 5,246,947 - BWI76_RS25230 0.67 +0.4 5,246,968 + BWI76_RS25230 0.70 -0.2 5,246,976 - BWI76_RS25230 0.71 -1.2 5,246,976 - BWI76_RS25230 0.71 -1.6 5,246,976 - BWI76_RS25230 0.71 +0.1 5,247,247 - -0.0 5,247,379 - +0.6 5,247,432 - +0.1 5,247,487 + -0.1 5,247,487 + +1.0 5,247,487 + +0.5 5,247,487 + +1.0 5,247,553 + BWI76_RS25235 0.13 +0.9 5,247,605 - BWI76_RS25235 0.19 -0.2 5,247,633 + BWI76_RS25235 0.22 -0.4 5,247,699 - BWI76_RS25235 0.28 +0.1 5,247,883 - BWI76_RS25235 0.47 +0.8 5,247,883 - -0.6 5,247,998 + BWI76_RS25235 0.59 -0.2 5,248,166 + BWI76_RS25235 0.76 +0.6 5,248,283 + BWI76_RS25235 0.88 -1.6 5,248,369 + -1.5 5,248,369 + +2.6 5,248,377 - +0.6 5,248,409 + -0.4 5,248,489 + +0.2 5,248,489 + -0.4 5,248,694 - BWI76_RS25240 0.28 +0.7 5,248,730 - BWI76_RS25240 0.32 -0.1 5,248,858 - BWI76_RS25240 0.45 +1.6 5,248,882 + BWI76_RS25240 0.47 +0.0 5,248,907 - BWI76_RS25240 0.50 +1.2 5,248,917 + BWI76_RS25240 0.51 -0.6 5,249,215 - BWI76_RS25240 0.81 +0.0 5,249,395 + +0.8
Or see this region's nucleotide sequence