Experiment: 2'-Deoxycytidine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20260 and BWI76_RS20265 are separated by 79 nucleotides BWI76_RS20265 and BWI76_RS20270 are separated by 236 nucleotides BWI76_RS20270 and BWI76_RS20275 are separated by 2 nucleotides BWI76_RS20275 and BWI76_RS20280 are separated by 58 nucleotides
BWI76_RS20260: BWI76_RS20260 - PTS mannitol transporter subunit IIB, at 4,247,032 to 4,247,304
_RS20260
BWI76_RS20265: BWI76_RS20265 - sugar phosphotransferase subunit IIA, at 4,247,384 to 4,247,827
_RS20265
BWI76_RS20270: BWI76_RS20270 - hypothetical protein, at 4,248,064 to 4,249,083
_RS20270
BWI76_RS20275: BWI76_RS20275 - NUDIX hydrolase, at 4,249,086 to 4,249,640
_RS20275
BWI76_RS20280: BWI76_RS20280 - phosphodiesterase, at 4,249,699 to 4,250,250
_RS20280
Position (kb) 4248
4249
4250 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 4247.064 kb on - strand, within BWI76_RS20260 at 4247.064 kb on - strand, within BWI76_RS20260 at 4247.064 kb on - strand, within BWI76_RS20260 at 4247.175 kb on + strand, within BWI76_RS20260 at 4247.180 kb on + strand, within BWI76_RS20260 at 4247.180 kb on + strand, within BWI76_RS20260 at 4247.188 kb on - strand, within BWI76_RS20260 at 4247.188 kb on - strand, within BWI76_RS20260 at 4247.188 kb on - strand, within BWI76_RS20260 at 4247.188 kb on - strand, within BWI76_RS20260 at 4247.188 kb on - strand, within BWI76_RS20260 at 4247.188 kb on - strand, within BWI76_RS20260 at 4247.188 kb on - strand, within BWI76_RS20260 at 4247.188 kb on - strand, within BWI76_RS20260 at 4247.190 kb on + strand, within BWI76_RS20260 at 4247.190 kb on + strand at 4247.195 kb on + strand at 4247.195 kb on + strand, within BWI76_RS20260 at 4247.197 kb on + strand, within BWI76_RS20260 at 4247.197 kb on + strand, within BWI76_RS20260 at 4247.197 kb on - strand, within BWI76_RS20260 at 4247.198 kb on - strand, within BWI76_RS20260 at 4247.198 kb on - strand, within BWI76_RS20260 at 4247.198 kb on - strand, within BWI76_RS20260 at 4247.198 kb on - strand, within BWI76_RS20260 at 4247.198 kb on - strand, within BWI76_RS20260 at 4247.198 kb on - strand, within BWI76_RS20260 at 4247.199 kb on + strand, within BWI76_RS20260 at 4247.200 kb on + strand, within BWI76_RS20260 at 4247.200 kb on + strand, within BWI76_RS20260 at 4247.207 kb on - strand, within BWI76_RS20260 at 4247.207 kb on - strand at 4247.207 kb on - strand, within BWI76_RS20260 at 4247.208 kb on - strand, within BWI76_RS20260 at 4247.208 kb on - strand, within BWI76_RS20260 at 4247.208 kb on - strand, within BWI76_RS20260 at 4247.208 kb on - strand, within BWI76_RS20260 at 4247.212 kb on - strand, within BWI76_RS20260 at 4247.213 kb on - strand, within BWI76_RS20260 at 4247.269 kb on + strand, within BWI76_RS20260 at 4247.269 kb on + strand, within BWI76_RS20260 at 4247.272 kb on - strand, within BWI76_RS20260 at 4247.274 kb on + strand, within BWI76_RS20260 at 4247.274 kb on + strand, within BWI76_RS20260 at 4247.277 kb on - strand at 4247.277 kb on - strand at 4247.277 kb on - strand at 4247.279 kb on + strand at 4247.282 kb on - strand at 4247.282 kb on - strand at 4247.282 kb on - strand at 4247.282 kb on - strand at 4247.282 kb on - strand at 4247.282 kb on - strand at 4247.282 kb on - strand at 4247.282 kb on - strand at 4247.282 kb on - strand at 4247.282 kb on - strand at 4247.282 kb on - strand at 4247.316 kb on + strand at 4247.326 kb on + strand at 4247.326 kb on + strand at 4247.326 kb on + strand at 4247.326 kb on + strand at 4247.326 kb on + strand at 4247.326 kb on + strand at 4247.326 kb on + strand at 4247.326 kb on + strand at 4247.334 kb on - strand at 4247.334 kb on - strand at 4247.334 kb on - strand at 4247.334 kb on - strand at 4247.344 kb on - strand at 4247.345 kb on - strand at 4247.347 kb on - strand at 4247.347 kb on - strand at 4247.354 kb on - strand at 4247.354 kb on - strand at 4247.421 kb on - strand at 4247.421 kb on - strand at 4247.427 kb on - strand at 4247.491 kb on - strand, within BWI76_RS20265 at 4247.543 kb on + strand, within BWI76_RS20265 at 4247.557 kb on + strand, within BWI76_RS20265 at 4247.579 kb on - strand, within BWI76_RS20265 at 4247.580 kb on + strand, within BWI76_RS20265 at 4247.580 kb on + strand, within BWI76_RS20265 at 4247.583 kb on - strand, within BWI76_RS20265 at 4247.596 kb on + strand, within BWI76_RS20265 at 4247.596 kb on + strand, within BWI76_RS20265 at 4247.596 kb on + strand, within BWI76_RS20265 at 4247.596 kb on + strand, within BWI76_RS20265 at 4247.596 kb on + strand, within BWI76_RS20265 at 4247.596 kb on + strand, within BWI76_RS20265 at 4247.596 kb on + strand, within BWI76_RS20265 at 4247.596 kb on + strand, within BWI76_RS20265 at 4247.597 kb on + strand, within BWI76_RS20265 at 4247.597 kb on + strand, within BWI76_RS20265 at 4247.604 kb on - strand at 4247.604 kb on - strand, within BWI76_RS20265 at 4247.604 kb on - strand, within BWI76_RS20265 at 4247.604 kb on - strand, within BWI76_RS20265 at 4247.604 kb on - strand, within BWI76_RS20265 at 4247.604 kb on - strand, within BWI76_RS20265 at 4247.604 kb on - strand, within BWI76_RS20265 at 4247.604 kb on - strand, within BWI76_RS20265 at 4247.605 kb on - strand, within BWI76_RS20265 at 4247.605 kb on - strand, within BWI76_RS20265 at 4247.613 kb on + strand, within BWI76_RS20265 at 4247.639 kb on + strand, within BWI76_RS20265 at 4247.656 kb on + strand, within BWI76_RS20265 at 4247.664 kb on - strand, within BWI76_RS20265 at 4247.675 kb on + strand at 4247.683 kb on - strand, within BWI76_RS20265 at 4247.683 kb on - strand, within BWI76_RS20265 at 4248.317 kb on + strand, within BWI76_RS20270 at 4248.402 kb on - strand, within BWI76_RS20270 at 4248.647 kb on - strand, within BWI76_RS20270 at 4248.689 kb on + strand, within BWI76_RS20270 at 4248.698 kb on - strand, within BWI76_RS20270 at 4248.726 kb on - strand, within BWI76_RS20270 at 4248.732 kb on + strand, within BWI76_RS20270 at 4248.845 kb on + strand, within BWI76_RS20270 at 4248.908 kb on + strand at 4249.402 kb on - strand, within BWI76_RS20275 at 4249.673 kb on - strand at 4249.776 kb on + strand, within BWI76_RS20280 at 4249.885 kb on - strand, within BWI76_RS20280 at 4249.922 kb on + strand, within BWI76_RS20280
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxycytidine 5 mM (C) remove 4,247,064 - BWI76_RS20260 0.12 -0.3 4,247,064 - BWI76_RS20260 0.12 +0.1 4,247,064 - BWI76_RS20260 0.12 +0.5 4,247,175 + BWI76_RS20260 0.52 +0.5 4,247,180 + BWI76_RS20260 0.54 -0.1 4,247,180 + BWI76_RS20260 0.54 +0.9 4,247,188 - BWI76_RS20260 0.57 +0.9 4,247,188 - BWI76_RS20260 0.57 -1.5 4,247,188 - BWI76_RS20260 0.57 +0.1 4,247,188 - BWI76_RS20260 0.57 +0.3 4,247,188 - BWI76_RS20260 0.57 -0.2 4,247,188 - BWI76_RS20260 0.57 +0.6 4,247,188 - BWI76_RS20260 0.57 -1.4 4,247,188 - BWI76_RS20260 0.57 -1.2 4,247,190 + BWI76_RS20260 0.58 -0.7 4,247,190 + -1.1 4,247,195 + +1.2 4,247,195 + BWI76_RS20260 0.60 +0.4 4,247,197 + BWI76_RS20260 0.60 -0.4 4,247,197 + BWI76_RS20260 0.60 -0.6 4,247,197 - BWI76_RS20260 0.60 -0.2 4,247,198 - BWI76_RS20260 0.61 -0.6 4,247,198 - BWI76_RS20260 0.61 -0.4 4,247,198 - BWI76_RS20260 0.61 +0.9 4,247,198 - BWI76_RS20260 0.61 +0.6 4,247,198 - BWI76_RS20260 0.61 -1.6 4,247,198 - BWI76_RS20260 0.61 +0.4 4,247,199 + BWI76_RS20260 0.61 -0.2 4,247,200 + BWI76_RS20260 0.62 +0.6 4,247,200 + BWI76_RS20260 0.62 -4.3 4,247,207 - BWI76_RS20260 0.64 -1.7 4,247,207 - +0.6 4,247,207 - BWI76_RS20260 0.64 +0.4 4,247,208 - BWI76_RS20260 0.64 -0.7 4,247,208 - BWI76_RS20260 0.64 +0.4 4,247,208 - BWI76_RS20260 0.64 -0.5 4,247,208 - BWI76_RS20260 0.64 +0.0 4,247,212 - BWI76_RS20260 0.66 -1.1 4,247,213 - BWI76_RS20260 0.66 +0.7 4,247,269 + BWI76_RS20260 0.87 +1.4 4,247,269 + BWI76_RS20260 0.87 -0.1 4,247,272 - BWI76_RS20260 0.88 +0.5 4,247,274 + BWI76_RS20260 0.89 -0.4 4,247,274 + BWI76_RS20260 0.89 -1.3 4,247,277 - -1.1 4,247,277 - -0.5 4,247,277 - +0.3 4,247,279 + -0.6 4,247,282 - +2.5 4,247,282 - +0.3 4,247,282 - -0.6 4,247,282 - +0.4 4,247,282 - -1.6 4,247,282 - -0.1 4,247,282 - -0.1 4,247,282 - -0.6 4,247,282 - +0.7 4,247,282 - -0.1 4,247,282 - -0.6 4,247,316 + -0.8 4,247,326 + -0.3 4,247,326 + -0.5 4,247,326 + +0.6 4,247,326 + -0.8 4,247,326 + +0.1 4,247,326 + +1.0 4,247,326 + -0.6 4,247,326 + +1.8 4,247,334 - +0.4 4,247,334 - +1.5 4,247,334 - +1.6 4,247,334 - +0.0 4,247,344 - -0.3 4,247,345 - -1.6 4,247,347 - -0.2 4,247,347 - +0.0 4,247,354 - -0.7 4,247,354 - -0.1 4,247,421 - -1.4 4,247,421 - -0.9 4,247,427 - -1.0 4,247,491 - BWI76_RS20265 0.24 +0.1 4,247,543 + BWI76_RS20265 0.36 +1.5 4,247,557 + BWI76_RS20265 0.39 +0.8 4,247,579 - BWI76_RS20265 0.44 -1.5 4,247,580 + BWI76_RS20265 0.44 -0.3 4,247,580 + BWI76_RS20265 0.44 +0.5 4,247,583 - BWI76_RS20265 0.45 -0.1 4,247,596 + BWI76_RS20265 0.48 +1.8 4,247,596 + BWI76_RS20265 0.48 -1.4 4,247,596 + BWI76_RS20265 0.48 -1.9 4,247,596 + BWI76_RS20265 0.48 -0.1 4,247,596 + BWI76_RS20265 0.48 -0.8 4,247,596 + BWI76_RS20265 0.48 +0.7 4,247,596 + BWI76_RS20265 0.48 +0.1 4,247,596 + BWI76_RS20265 0.48 +0.4 4,247,597 + BWI76_RS20265 0.48 +0.3 4,247,597 + BWI76_RS20265 0.48 +0.6 4,247,604 - +2.3 4,247,604 - BWI76_RS20265 0.50 -0.3 4,247,604 - BWI76_RS20265 0.50 -0.2 4,247,604 - BWI76_RS20265 0.50 -0.1 4,247,604 - BWI76_RS20265 0.50 +0.4 4,247,604 - BWI76_RS20265 0.50 +0.6 4,247,604 - BWI76_RS20265 0.50 -0.6 4,247,604 - BWI76_RS20265 0.50 +0.3 4,247,605 - BWI76_RS20265 0.50 -0.2 4,247,605 - BWI76_RS20265 0.50 -0.9 4,247,613 + BWI76_RS20265 0.52 -1.3 4,247,639 + BWI76_RS20265 0.57 +0.2 4,247,656 + BWI76_RS20265 0.61 +0.6 4,247,664 - BWI76_RS20265 0.63 +0.1 4,247,675 + +0.9 4,247,683 - BWI76_RS20265 0.67 -2.3 4,247,683 - BWI76_RS20265 0.67 +2.4 4,248,317 + BWI76_RS20270 0.25 -1.6 4,248,402 - BWI76_RS20270 0.33 -0.8 4,248,647 - BWI76_RS20270 0.57 -2.1 4,248,689 + BWI76_RS20270 0.61 +1.2 4,248,698 - BWI76_RS20270 0.62 -2.3 4,248,726 - BWI76_RS20270 0.65 -1.5 4,248,732 + BWI76_RS20270 0.65 -0.1 4,248,845 + BWI76_RS20270 0.77 -1.8 4,248,908 + -1.1 4,249,402 - BWI76_RS20275 0.57 -0.4 4,249,673 - -1.3 4,249,776 + BWI76_RS20280 0.14 +0.8 4,249,885 - BWI76_RS20280 0.34 -3.7 4,249,922 + BWI76_RS20280 0.40 +0.2
Or see this region's nucleotide sequence