Experiment: 2'-Deoxycytidine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14565 and BWI76_RS14570 are separated by 28 nucleotides BWI76_RS14570 and BWI76_RS14575 are separated by 88 nucleotides BWI76_RS14575 and BWI76_RS14580 overlap by 1 nucleotides BWI76_RS14580 and BWI76_RS14585 are separated by 26 nucleotides
BWI76_RS14565: BWI76_RS14565 - cysteine hydrolase, at 3,058,393 to 3,058,926
_RS14565
BWI76_RS14570: BWI76_RS14570 - hypothetical protein, at 3,058,955 to 3,059,515
_RS14570
BWI76_RS14575: BWI76_RS14575 - TENA/THI-4 family protein, at 3,059,604 to 3,060,248
_RS14575
BWI76_RS14580: BWI76_RS14580 - hypothetical protein, at 3,060,248 to 3,061,093
_RS14580
BWI76_RS14585: BWI76_RS14585 - ribokinase, at 3,061,120 to 3,061,992
_RS14585
Position (kb)
3059
3060
3061 Strain fitness (log2 ratio)
-2
-1
0
1 at 3059.281 kb on + strand, within BWI76_RS14570 at 3059.324 kb on + strand, within BWI76_RS14570 at 3059.353 kb on - strand, within BWI76_RS14570 at 3059.370 kb on - strand, within BWI76_RS14570 at 3059.548 kb on + strand at 3059.548 kb on + strand at 3059.651 kb on - strand at 3059.768 kb on + strand, within BWI76_RS14575 at 3059.982 kb on - strand, within BWI76_RS14575 at 3060.294 kb on + strand at 3060.335 kb on - strand, within BWI76_RS14580 at 3060.403 kb on + strand, within BWI76_RS14580 at 3060.411 kb on - strand, within BWI76_RS14580 at 3060.477 kb on + strand, within BWI76_RS14580 at 3060.737 kb on + strand at 3060.745 kb on - strand, within BWI76_RS14580 at 3060.772 kb on + strand, within BWI76_RS14580 at 3060.783 kb on - strand, within BWI76_RS14580 at 3060.790 kb on - strand, within BWI76_RS14580 at 3060.790 kb on - strand, within BWI76_RS14580 at 3060.852 kb on + strand at 3060.872 kb on - strand, within BWI76_RS14580 at 3060.875 kb on + strand, within BWI76_RS14580 at 3061.004 kb on - strand, within BWI76_RS14580 at 3061.110 kb on + strand at 3061.110 kb on + strand at 3061.110 kb on + strand at 3061.118 kb on - strand at 3061.118 kb on - strand at 3061.118 kb on - strand at 3061.118 kb on - strand at 3061.118 kb on - strand at 3061.213 kb on - strand, within BWI76_RS14585
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxycytidine 5 mM (C) remove 3,059,281 + BWI76_RS14570 0.58 +0.0 3,059,324 + BWI76_RS14570 0.66 +0.3 3,059,353 - BWI76_RS14570 0.71 -0.1 3,059,370 - BWI76_RS14570 0.74 -0.6 3,059,548 + -0.3 3,059,548 + +0.0 3,059,651 - +0.1 3,059,768 + BWI76_RS14575 0.25 -1.4 3,059,982 - BWI76_RS14575 0.59 -1.2 3,060,294 + -0.6 3,060,335 - BWI76_RS14580 0.10 -0.4 3,060,403 + BWI76_RS14580 0.18 +0.6 3,060,411 - BWI76_RS14580 0.19 +1.4 3,060,477 + BWI76_RS14580 0.27 +0.3 3,060,737 + -1.3 3,060,745 - BWI76_RS14580 0.59 -0.3 3,060,772 + BWI76_RS14580 0.62 +0.4 3,060,783 - BWI76_RS14580 0.63 +1.5 3,060,790 - BWI76_RS14580 0.64 +0.3 3,060,790 - BWI76_RS14580 0.64 -1.3 3,060,852 + -1.0 3,060,872 - BWI76_RS14580 0.74 -0.5 3,060,875 + BWI76_RS14580 0.74 -0.3 3,061,004 - BWI76_RS14580 0.89 -0.2 3,061,110 + -0.6 3,061,110 + +0.0 3,061,110 + -0.6 3,061,118 - -0.5 3,061,118 - +0.5 3,061,118 - -1.6 3,061,118 - -1.9 3,061,118 - -0.8 3,061,213 - BWI76_RS14585 0.11 -1.0
Or see this region's nucleotide sequence