Experiment: 2'-Deoxycytidine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS04125 and BWI76_RS04130 are separated by 414 nucleotides BWI76_RS04130 and BWI76_RS04135 are separated by 77 nucleotides
BWI76_RS04125: BWI76_RS04125 - NupC/NupG family nucleoside CNT transporter, at 847,876 to 849,153
_RS04125
BWI76_RS04130: BWI76_RS04130 - 2-deoxyribose-5-phosphate aldolase, at 849,568 to 850,347
_RS04130
BWI76_RS04135: BWI76_RS04135 - thymidine phosphorylase, at 850,425 to 851,747
_RS04135
Position (kb) 849
850
851 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1 at 848.874 kb on + strand, within BWI76_RS04125 at 848.956 kb on - strand, within BWI76_RS04125 at 848.958 kb on + strand, within BWI76_RS04125 at 848.975 kb on + strand, within BWI76_RS04125 at 849.148 kb on + strand at 849.483 kb on - strand at 849.607 kb on - strand at 849.727 kb on - strand, within BWI76_RS04130 at 849.761 kb on + strand, within BWI76_RS04130 at 849.776 kb on + strand, within BWI76_RS04130 at 849.828 kb on + strand, within BWI76_RS04130 at 849.870 kb on - strand, within BWI76_RS04130 at 849.928 kb on - strand, within BWI76_RS04130 at 849.933 kb on - strand, within BWI76_RS04130 at 850.241 kb on - strand, within BWI76_RS04130 at 850.396 kb on + strand at 850.652 kb on - strand, within BWI76_RS04135 at 850.836 kb on + strand, within BWI76_RS04135 at 851.062 kb on + strand, within BWI76_RS04135 at 851.062 kb on + strand, within BWI76_RS04135 at 851.077 kb on - strand, within BWI76_RS04135 at 851.136 kb on + strand at 851.331 kb on + strand, within BWI76_RS04135 at 851.339 kb on - strand, within BWI76_RS04135 at 851.339 kb on - strand, within BWI76_RS04135
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxycytidine 5 mM (C) remove 848,874 + BWI76_RS04125 0.78 -0.4 848,956 - BWI76_RS04125 0.85 -0.0 848,958 + BWI76_RS04125 0.85 -0.2 848,975 + BWI76_RS04125 0.86 -0.8 849,148 + +1.4 849,483 - -3.2 849,607 - -5.3 849,727 - BWI76_RS04130 0.20 -3.7 849,761 + BWI76_RS04130 0.25 -0.6 849,776 + BWI76_RS04130 0.27 -4.8 849,828 + BWI76_RS04130 0.33 -3.6 849,870 - BWI76_RS04130 0.39 -3.7 849,928 - BWI76_RS04130 0.46 -0.9 849,933 - BWI76_RS04130 0.47 -4.7 850,241 - BWI76_RS04130 0.86 -2.5 850,396 + -1.6 850,652 - BWI76_RS04135 0.17 -5.8 850,836 + BWI76_RS04135 0.31 -4.0 851,062 + BWI76_RS04135 0.48 -3.5 851,062 + BWI76_RS04135 0.48 -4.1 851,077 - BWI76_RS04135 0.49 -2.9 851,136 + -0.0 851,331 + BWI76_RS04135 0.68 -4.6 851,339 - BWI76_RS04135 0.69 -5.0 851,339 - BWI76_RS04135 0.69 -1.9
Or see this region's nucleotide sequence