Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS00765

Experiment: 2'-Deoxycytidine 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS00760 and BWI76_RS00765 are separated by 91 nucleotidesBWI76_RS00765 and BWI76_RS00770 are separated by 150 nucleotides BWI76_RS00760: BWI76_RS00760 - cell division protein FtsN, at 154,237 to 155,211 _RS00760 BWI76_RS00765: BWI76_RS00765 - DNA-binding transcriptional regulator CytR, at 155,303 to 156,331 _RS00765 BWI76_RS00770: BWI76_RS00770 - primosomal protein N', at 156,482 to 158,677 _RS00770 Position (kb) 155 156 157Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7 8 9at 154.369 kb on - strand, within BWI76_RS00760at 154.417 kb on - strand, within BWI76_RS00760at 154.532 kb on + strand, within BWI76_RS00760at 154.540 kb on - strand, within BWI76_RS00760at 154.540 kb on - strand, within BWI76_RS00760at 154.540 kb on - strand, within BWI76_RS00760at 154.565 kb on - strand, within BWI76_RS00760at 155.382 kb on - strandat 155.397 kb on + strandat 155.521 kb on + strand, within BWI76_RS00765at 155.521 kb on + strand, within BWI76_RS00765at 155.973 kb on - strand, within BWI76_RS00765at 156.005 kb on + strand, within BWI76_RS00765at 156.005 kb on + strand, within BWI76_RS00765at 156.005 kb on + strand, within BWI76_RS00765at 156.041 kb on + strand, within BWI76_RS00765at 156.059 kb on + strand, within BWI76_RS00765at 156.362 kb on + strandat 156.487 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 2'-Deoxycytidine 5 mM (C)
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154,369 - BWI76_RS00760 0.14 -0.3
154,417 - BWI76_RS00760 0.18 +0.0
154,532 + BWI76_RS00760 0.30 -1.0
154,540 - BWI76_RS00760 0.31 -0.9
154,540 - BWI76_RS00760 0.31 -1.8
154,540 - BWI76_RS00760 0.31 -0.5
154,565 - BWI76_RS00760 0.34 -3.1
155,382 - +7.0
155,397 + +7.8
155,521 + BWI76_RS00765 0.21 +7.8
155,521 + BWI76_RS00765 0.21 +7.9
155,973 - BWI76_RS00765 0.65 +7.4
156,005 + BWI76_RS00765 0.68 +7.4
156,005 + BWI76_RS00765 0.68 +7.8
156,005 + BWI76_RS00765 0.68 +7.3
156,041 + BWI76_RS00765 0.72 +9.4
156,059 + BWI76_RS00765 0.73 +8.2
156,362 + +7.1
156,487 - -1.4

Or see this region's nucleotide sequence