Experiment: KB with Cantharidin 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_1508 and Psyr_1509 are separated by 558 nucleotides Psyr_1509 and Psyr_1510 are separated by 31 nucleotides
Psyr_1508: Psyr_1508 - Phage integrase:Phage integrase, N-terminal SAM-like protein, at 1,694,121 to 1,695,080
_1508
Psyr_1509: Psyr_1509 - PilM protein, putative, at 1,695,639 to 1,696,079
_1509
Psyr_1510: Psyr_1510 - prepilin, at 1,696,111 to 1,697,517
_1510
Position (kb) 1695
1696
1697 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 1694.678 kb on + strand, within Psyr_1508 at 1694.750 kb on + strand, within Psyr_1508 at 1694.750 kb on + strand, within Psyr_1508 at 1694.750 kb on + strand, within Psyr_1508 at 1694.750 kb on + strand, within Psyr_1508 at 1694.750 kb on + strand, within Psyr_1508 at 1694.750 kb on + strand, within Psyr_1508 at 1694.750 kb on + strand, within Psyr_1508 at 1694.750 kb on + strand, within Psyr_1508 at 1694.751 kb on - strand, within Psyr_1508 at 1694.751 kb on - strand, within Psyr_1508 at 1694.751 kb on - strand, within Psyr_1508 at 1694.754 kb on + strand, within Psyr_1508 at 1694.754 kb on + strand, within Psyr_1508 at 1694.754 kb on + strand, within Psyr_1508 at 1694.754 kb on + strand, within Psyr_1508 at 1694.754 kb on + strand, within Psyr_1508 at 1694.754 kb on + strand, within Psyr_1508 at 1694.754 kb on + strand, within Psyr_1508 at 1694.754 kb on + strand, within Psyr_1508 at 1694.755 kb on - strand, within Psyr_1508 at 1694.755 kb on - strand, within Psyr_1508 at 1694.755 kb on - strand, within Psyr_1508 at 1694.755 kb on - strand, within Psyr_1508 at 1694.755 kb on - strand, within Psyr_1508 at 1694.755 kb on - strand, within Psyr_1508 at 1694.755 kb on - strand, within Psyr_1508 at 1694.755 kb on - strand, within Psyr_1508 at 1694.760 kb on + strand, within Psyr_1508 at 1694.760 kb on + strand, within Psyr_1508 at 1694.760 kb on + strand, within Psyr_1508 at 1694.760 kb on + strand, within Psyr_1508 at 1694.760 kb on + strand, within Psyr_1508 at 1694.760 kb on + strand, within Psyr_1508 at 1694.760 kb on + strand, within Psyr_1508 at 1694.760 kb on + strand, within Psyr_1508 at 1694.760 kb on + strand, within Psyr_1508 at 1694.760 kb on + strand, within Psyr_1508 at 1694.760 kb on + strand, within Psyr_1508 at 1694.760 kb on + strand, within Psyr_1508 at 1694.760 kb on + strand, within Psyr_1508 at 1694.760 kb on + strand, within Psyr_1508 at 1694.760 kb on + strand, within Psyr_1508 at 1694.761 kb on - strand, within Psyr_1508 at 1694.761 kb on - strand, within Psyr_1508 at 1694.761 kb on - strand, within Psyr_1508 at 1694.761 kb on - strand, within Psyr_1508 at 1694.761 kb on - strand, within Psyr_1508 at 1694.761 kb on - strand, within Psyr_1508 at 1694.761 kb on - strand, within Psyr_1508 at 1694.761 kb on - strand, within Psyr_1508 at 1694.761 kb on - strand, within Psyr_1508 at 1694.761 kb on - strand, within Psyr_1508 at 1694.761 kb on - strand, within Psyr_1508 at 1694.761 kb on - strand, within Psyr_1508 at 1694.761 kb on - strand, within Psyr_1508 at 1694.761 kb on - strand, within Psyr_1508 at 1694.761 kb on - strand, within Psyr_1508 at 1694.761 kb on - strand, within Psyr_1508 at 1694.761 kb on - strand, within Psyr_1508 at 1694.762 kb on + strand, within Psyr_1508 at 1694.762 kb on + strand, within Psyr_1508 at 1694.762 kb on + strand, within Psyr_1508 at 1694.763 kb on - strand, within Psyr_1508 at 1694.763 kb on - strand, within Psyr_1508 at 1694.807 kb on + strand, within Psyr_1508 at 1694.808 kb on - strand, within Psyr_1508 at 1694.859 kb on + strand, within Psyr_1508 at 1694.859 kb on + strand, within Psyr_1508 at 1694.860 kb on - strand, within Psyr_1508 at 1694.860 kb on - strand, within Psyr_1508 at 1694.860 kb on - strand, within Psyr_1508 at 1694.860 kb on - strand, within Psyr_1508 at 1694.862 kb on - strand, within Psyr_1508 at 1694.862 kb on - strand, within Psyr_1508 at 1694.862 kb on - strand, within Psyr_1508 at 1694.943 kb on - strand, within Psyr_1508 at 1695.024 kb on + strand at 1695.024 kb on + strand at 1695.024 kb on + strand at 1695.025 kb on - strand at 1695.025 kb on - strand at 1695.025 kb on - strand at 1695.025 kb on - strand at 1695.065 kb on + strand at 1695.075 kb on + strand at 1695.075 kb on + strand at 1695.114 kb on - strand at 1695.131 kb on + strand at 1695.132 kb on - strand at 1695.132 kb on - strand at 1695.132 kb on - strand at 1695.140 kb on + strand at 1695.140 kb on + strand at 1695.140 kb on + strand at 1695.144 kb on + strand at 1695.144 kb on + strand at 1695.144 kb on + strand at 1695.144 kb on + strand at 1695.145 kb on - strand at 1695.185 kb on + strand at 1695.185 kb on + strand at 1695.186 kb on - strand at 1695.210 kb on + strand at 1695.211 kb on - strand at 1695.211 kb on - strand at 1695.211 kb on - strand at 1695.242 kb on + strand at 1695.242 kb on + strand at 1695.248 kb on + strand at 1695.249 kb on - strand at 1695.249 kb on - strand at 1695.347 kb on + strand at 1695.347 kb on + strand at 1695.347 kb on + strand at 1695.347 kb on + strand at 1695.348 kb on - strand at 1695.348 kb on - strand at 1695.348 kb on - strand at 1695.405 kb on + strand at 1695.414 kb on + strand at 1695.415 kb on - strand at 1695.432 kb on + strand at 1695.433 kb on - strand at 1695.433 kb on - strand at 1695.446 kb on - strand at 1695.494 kb on + strand at 1695.495 kb on - strand at 1695.495 kb on - strand at 1695.554 kb on + strand at 1695.555 kb on - strand at 1695.568 kb on + strand at 1695.569 kb on - strand at 1695.569 kb on - strand at 1695.669 kb on + strand at 1695.814 kb on + strand, within Psyr_1509 at 1695.814 kb on + strand, within Psyr_1509 at 1695.863 kb on - strand, within Psyr_1509 at 1695.922 kb on + strand, within Psyr_1509 at 1695.922 kb on + strand, within Psyr_1509 at 1695.922 kb on + strand, within Psyr_1509 at 1695.923 kb on - strand, within Psyr_1509 at 1695.923 kb on - strand, within Psyr_1509 at 1695.928 kb on + strand, within Psyr_1509 at 1695.950 kb on - strand, within Psyr_1509 at 1695.962 kb on + strand, within Psyr_1509 at 1695.963 kb on - strand, within Psyr_1509 at 1695.963 kb on - strand, within Psyr_1509 at 1695.984 kb on + strand, within Psyr_1509 at 1696.025 kb on - strand, within Psyr_1509 at 1696.046 kb on + strand at 1696.046 kb on + strand at 1696.069 kb on + strand at 1696.082 kb on + strand at 1696.082 kb on + strand at 1696.082 kb on + strand at 1696.083 kb on - strand at 1696.083 kb on - strand at 1696.083 kb on - strand at 1696.083 kb on - strand at 1696.083 kb on - strand at 1696.100 kb on + strand at 1696.100 kb on + strand at 1696.100 kb on + strand at 1696.100 kb on + strand at 1696.100 kb on + strand at 1696.101 kb on - strand at 1696.101 kb on - strand at 1696.101 kb on - strand at 1696.101 kb on - strand at 1696.101 kb on - strand at 1696.101 kb on - strand at 1696.220 kb on + strand at 1696.220 kb on + strand at 1696.238 kb on + strand at 1696.238 kb on + strand at 1696.238 kb on + strand at 1696.238 kb on + strand at 1696.238 kb on + strand at 1696.238 kb on + strand at 1696.239 kb on - strand at 1696.239 kb on - strand at 1696.239 kb on - strand at 1696.242 kb on + strand at 1696.242 kb on + strand at 1696.243 kb on - strand at 1696.369 kb on - strand, within Psyr_1510 at 1696.369 kb on - strand, within Psyr_1510 at 1696.421 kb on + strand, within Psyr_1510 at 1696.422 kb on - strand, within Psyr_1510 at 1696.485 kb on - strand, within Psyr_1510 at 1696.532 kb on + strand, within Psyr_1510 at 1696.532 kb on + strand, within Psyr_1510 at 1696.532 kb on + strand, within Psyr_1510 at 1696.532 kb on + strand, within Psyr_1510 at 1696.532 kb on + strand, within Psyr_1510 at 1696.532 kb on + strand, within Psyr_1510 at 1696.533 kb on - strand, within Psyr_1510 at 1696.533 kb on - strand, within Psyr_1510 at 1696.533 kb on - strand, within Psyr_1510 at 1696.533 kb on - strand, within Psyr_1510 at 1696.533 kb on - strand, within Psyr_1510 at 1696.533 kb on - strand, within Psyr_1510 at 1696.560 kb on - strand, within Psyr_1510 at 1696.667 kb on + strand, within Psyr_1510 at 1696.667 kb on + strand, within Psyr_1510 at 1696.668 kb on - strand, within Psyr_1510 at 1696.668 kb on - strand, within Psyr_1510 at 1696.669 kb on + strand, within Psyr_1510 at 1696.669 kb on + strand, within Psyr_1510 at 1696.669 kb on + strand, within Psyr_1510 at 1696.669 kb on + strand, within Psyr_1510 at 1696.669 kb on + strand, within Psyr_1510 at 1696.669 kb on + strand, within Psyr_1510 at 1696.669 kb on + strand, within Psyr_1510 at 1696.669 kb on + strand, within Psyr_1510 at 1696.669 kb on + strand, within Psyr_1510 at 1696.669 kb on + strand, within Psyr_1510 at 1696.669 kb on + strand, within Psyr_1510 at 1696.669 kb on + strand, within Psyr_1510 at 1696.670 kb on - strand, within Psyr_1510 at 1696.670 kb on - strand, within Psyr_1510 at 1696.670 kb on - strand, within Psyr_1510 at 1696.670 kb on - strand, within Psyr_1510 at 1696.670 kb on - strand, within Psyr_1510 at 1696.670 kb on - strand, within Psyr_1510 at 1696.670 kb on - strand, within Psyr_1510 at 1696.670 kb on - strand, within Psyr_1510 at 1696.670 kb on - strand, within Psyr_1510 at 1696.670 kb on - strand, within Psyr_1510 at 1696.670 kb on - strand, within Psyr_1510 at 1696.670 kb on - strand, within Psyr_1510 at 1696.670 kb on - strand, within Psyr_1510 at 1696.670 kb on - strand, within Psyr_1510 at 1696.670 kb on - strand, within Psyr_1510 at 1696.670 kb on - strand, within Psyr_1510 at 1696.670 kb on - strand, within Psyr_1510 at 1696.800 kb on + strand, within Psyr_1510 at 1696.800 kb on + strand, within Psyr_1510 at 1696.800 kb on + strand, within Psyr_1510 at 1696.801 kb on - strand, within Psyr_1510 at 1696.801 kb on - strand, within Psyr_1510 at 1696.929 kb on - strand, within Psyr_1510 at 1697.000 kb on + strand, within Psyr_1510 at 1697.000 kb on + strand, within Psyr_1510 at 1697.001 kb on - strand, within Psyr_1510 at 1697.001 kb on - strand, within Psyr_1510 at 1697.032 kb on + strand, within Psyr_1510 at 1697.032 kb on + strand, within Psyr_1510
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Cantharidin 10 mM remove 1,694,678 + Psyr_1508 0.58 -0.2 1,694,750 + Psyr_1508 0.66 -0.4 1,694,750 + Psyr_1508 0.66 -1.2 1,694,750 + Psyr_1508 0.66 +0.4 1,694,750 + Psyr_1508 0.66 +0.6 1,694,750 + Psyr_1508 0.66 -0.6 1,694,750 + Psyr_1508 0.66 +1.4 1,694,750 + Psyr_1508 0.66 +1.4 1,694,750 + Psyr_1508 0.66 +0.0 1,694,751 - Psyr_1508 0.66 -0.9 1,694,751 - Psyr_1508 0.66 -0.0 1,694,751 - Psyr_1508 0.66 -0.8 1,694,754 + Psyr_1508 0.66 -0.2 1,694,754 + Psyr_1508 0.66 +0.0 1,694,754 + Psyr_1508 0.66 -0.4 1,694,754 + Psyr_1508 0.66 -1.3 1,694,754 + Psyr_1508 0.66 +0.1 1,694,754 + Psyr_1508 0.66 -0.2 1,694,754 + Psyr_1508 0.66 +1.2 1,694,754 + Psyr_1508 0.66 -0.3 1,694,755 - Psyr_1508 0.66 +1.0 1,694,755 - Psyr_1508 0.66 -0.3 1,694,755 - Psyr_1508 0.66 +0.5 1,694,755 - Psyr_1508 0.66 -1.0 1,694,755 - Psyr_1508 0.66 +0.5 1,694,755 - Psyr_1508 0.66 -1.9 1,694,755 - Psyr_1508 0.66 -0.3 1,694,755 - Psyr_1508 0.66 +0.8 1,694,760 + Psyr_1508 0.67 -0.4 1,694,760 + Psyr_1508 0.67 +0.1 1,694,760 + Psyr_1508 0.67 -0.1 1,694,760 + Psyr_1508 0.67 -0.2 1,694,760 + Psyr_1508 0.67 +0.2 1,694,760 + Psyr_1508 0.67 +0.4 1,694,760 + Psyr_1508 0.67 -0.9 1,694,760 + Psyr_1508 0.67 +0.7 1,694,760 + Psyr_1508 0.67 +0.1 1,694,760 + Psyr_1508 0.67 -1.3 1,694,760 + Psyr_1508 0.67 -0.4 1,694,760 + Psyr_1508 0.67 +0.1 1,694,760 + Psyr_1508 0.67 -0.1 1,694,760 + Psyr_1508 0.67 -0.0 1,694,760 + Psyr_1508 0.67 +0.6 1,694,761 - Psyr_1508 0.67 +0.6 1,694,761 - Psyr_1508 0.67 +0.6 1,694,761 - Psyr_1508 0.67 +0.6 1,694,761 - Psyr_1508 0.67 +1.1 1,694,761 - Psyr_1508 0.67 -0.1 1,694,761 - Psyr_1508 0.67 -0.1 1,694,761 - Psyr_1508 0.67 -0.3 1,694,761 - Psyr_1508 0.67 -0.4 1,694,761 - Psyr_1508 0.67 +0.8 1,694,761 - Psyr_1508 0.67 +3.6 1,694,761 - Psyr_1508 0.67 -0.6 1,694,761 - Psyr_1508 0.67 +0.5 1,694,761 - Psyr_1508 0.67 -0.8 1,694,761 - Psyr_1508 0.67 -0.2 1,694,761 - Psyr_1508 0.67 +0.3 1,694,761 - Psyr_1508 0.67 +0.6 1,694,761 - Psyr_1508 0.67 -0.9 1,694,762 + Psyr_1508 0.67 -0.7 1,694,762 + Psyr_1508 0.67 -0.0 1,694,762 + Psyr_1508 0.67 -0.4 1,694,763 - Psyr_1508 0.67 +0.3 1,694,763 - Psyr_1508 0.67 +0.9 1,694,807 + Psyr_1508 0.71 +0.4 1,694,808 - Psyr_1508 0.72 -0.6 1,694,859 + Psyr_1508 0.77 +1.1 1,694,859 + Psyr_1508 0.77 +0.2 1,694,860 - Psyr_1508 0.77 +0.1 1,694,860 - Psyr_1508 0.77 -0.6 1,694,860 - Psyr_1508 0.77 +0.8 1,694,860 - Psyr_1508 0.77 -1.0 1,694,862 - Psyr_1508 0.77 -0.1 1,694,862 - Psyr_1508 0.77 -0.7 1,694,862 - Psyr_1508 0.77 +0.4 1,694,943 - Psyr_1508 0.86 -0.1 1,695,024 + +0.8 1,695,024 + -0.0 1,695,024 + -0.4 1,695,025 - -0.9 1,695,025 - +0.5 1,695,025 - +0.0 1,695,025 - +0.6 1,695,065 + +1.0 1,695,075 + +0.4 1,695,075 + +0.9 1,695,114 - +0.8 1,695,131 + -0.6 1,695,132 - +0.2 1,695,132 - +0.2 1,695,132 - +0.2 1,695,140 + +0.5 1,695,140 + -1.3 1,695,140 + -0.8 1,695,144 + +0.8 1,695,144 + +0.2 1,695,144 + +0.4 1,695,144 + -0.2 1,695,145 - +1.2 1,695,185 + -1.1 1,695,185 + -0.1 1,695,186 - -1.4 1,695,210 + -0.1 1,695,211 - +1.1 1,695,211 - -0.4 1,695,211 - +0.7 1,695,242 + -0.4 1,695,242 + -1.4 1,695,248 + +0.4 1,695,249 - +0.6 1,695,249 - -0.3 1,695,347 + +0.1 1,695,347 + +0.9 1,695,347 + -0.6 1,695,347 + +0.0 1,695,348 - -0.6 1,695,348 - +0.6 1,695,348 - -1.0 1,695,405 + -1.3 1,695,414 + -0.8 1,695,415 - +1.1 1,695,432 + +0.2 1,695,433 - -0.1 1,695,433 - +0.5 1,695,446 - -1.4 1,695,494 + -0.4 1,695,495 - -0.2 1,695,495 - -0.6 1,695,554 + +0.3 1,695,555 - -0.5 1,695,568 + +0.6 1,695,569 - +0.2 1,695,569 - -0.6 1,695,669 + -1.7 1,695,814 + Psyr_1509 0.40 -0.6 1,695,814 + Psyr_1509 0.40 -0.7 1,695,863 - Psyr_1509 0.51 -1.0 1,695,922 + Psyr_1509 0.64 -0.5 1,695,922 + Psyr_1509 0.64 -0.9 1,695,922 + Psyr_1509 0.64 -0.5 1,695,923 - Psyr_1509 0.64 -1.4 1,695,923 - Psyr_1509 0.64 -0.7 1,695,928 + Psyr_1509 0.66 -0.1 1,695,950 - Psyr_1509 0.71 -1.3 1,695,962 + Psyr_1509 0.73 +0.6 1,695,963 - Psyr_1509 0.73 -1.6 1,695,963 - Psyr_1509 0.73 +0.2 1,695,984 + Psyr_1509 0.78 -1.3 1,696,025 - Psyr_1509 0.88 -0.2 1,696,046 + -1.6 1,696,046 + -0.6 1,696,069 + -1.4 1,696,082 + -0.6 1,696,082 + -1.4 1,696,082 + -0.4 1,696,083 - -0.7 1,696,083 - -0.0 1,696,083 - -0.2 1,696,083 - -0.8 1,696,083 - -2.5 1,696,100 + +1.2 1,696,100 + -0.8 1,696,100 + -1.0 1,696,100 + -1.1 1,696,100 + +0.4 1,696,101 - +0.6 1,696,101 - +0.1 1,696,101 - +0.5 1,696,101 - +0.2 1,696,101 - -1.9 1,696,101 - -2.6 1,696,220 + -1.1 1,696,220 + +1.1 1,696,238 + -0.0 1,696,238 + -1.8 1,696,238 + -2.7 1,696,238 + +0.8 1,696,238 + -3.1 1,696,238 + +1.2 1,696,239 - -0.4 1,696,239 - +1.1 1,696,239 - -0.8 1,696,242 + -0.8 1,696,242 + -1.1 1,696,243 - -1.2 1,696,369 - Psyr_1510 0.18 -0.0 1,696,369 - Psyr_1510 0.18 -1.7 1,696,421 + Psyr_1510 0.22 +0.2 1,696,422 - Psyr_1510 0.22 +0.3 1,696,485 - Psyr_1510 0.27 +2.4 1,696,532 + Psyr_1510 0.30 -1.4 1,696,532 + Psyr_1510 0.30 +0.2 1,696,532 + Psyr_1510 0.30 +1.2 1,696,532 + Psyr_1510 0.30 -0.8 1,696,532 + Psyr_1510 0.30 +0.8 1,696,532 + Psyr_1510 0.30 -0.8 1,696,533 - Psyr_1510 0.30 -1.1 1,696,533 - Psyr_1510 0.30 +0.6 1,696,533 - Psyr_1510 0.30 +0.1 1,696,533 - Psyr_1510 0.30 -0.7 1,696,533 - Psyr_1510 0.30 +0.2 1,696,533 - Psyr_1510 0.30 +0.7 1,696,560 - Psyr_1510 0.32 +0.5 1,696,667 + Psyr_1510 0.40 -0.4 1,696,667 + Psyr_1510 0.40 -0.2 1,696,668 - Psyr_1510 0.40 +0.8 1,696,668 - Psyr_1510 0.40 +0.6 1,696,669 + Psyr_1510 0.40 +0.9 1,696,669 + Psyr_1510 0.40 -0.6 1,696,669 + Psyr_1510 0.40 +0.1 1,696,669 + Psyr_1510 0.40 +0.2 1,696,669 + Psyr_1510 0.40 +0.3 1,696,669 + Psyr_1510 0.40 -0.6 1,696,669 + Psyr_1510 0.40 -0.3 1,696,669 + Psyr_1510 0.40 -0.4 1,696,669 + Psyr_1510 0.40 -0.1 1,696,669 + Psyr_1510 0.40 -0.4 1,696,669 + Psyr_1510 0.40 +0.6 1,696,669 + Psyr_1510 0.40 +0.1 1,696,670 - Psyr_1510 0.40 +0.0 1,696,670 - Psyr_1510 0.40 -0.5 1,696,670 - Psyr_1510 0.40 -0.6 1,696,670 - Psyr_1510 0.40 +0.2 1,696,670 - Psyr_1510 0.40 +0.7 1,696,670 - Psyr_1510 0.40 +0.7 1,696,670 - Psyr_1510 0.40 -0.5 1,696,670 - Psyr_1510 0.40 +2.0 1,696,670 - Psyr_1510 0.40 -0.7 1,696,670 - Psyr_1510 0.40 +0.1 1,696,670 - Psyr_1510 0.40 +0.2 1,696,670 - Psyr_1510 0.40 -0.4 1,696,670 - Psyr_1510 0.40 -0.2 1,696,670 - Psyr_1510 0.40 -1.8 1,696,670 - Psyr_1510 0.40 -0.2 1,696,670 - Psyr_1510 0.40 -0.9 1,696,670 - Psyr_1510 0.40 -0.5 1,696,800 + Psyr_1510 0.49 +0.0 1,696,800 + Psyr_1510 0.49 +0.9 1,696,800 + Psyr_1510 0.49 -0.4 1,696,801 - Psyr_1510 0.49 +0.9 1,696,801 - Psyr_1510 0.49 -1.7 1,696,929 - Psyr_1510 0.58 +1.2 1,697,000 + Psyr_1510 0.63 +0.6 1,697,000 + Psyr_1510 0.63 -2.8 1,697,001 - Psyr_1510 0.63 +0.1 1,697,001 - Psyr_1510 0.63 +0.6 1,697,032 + Psyr_1510 0.65 +0.2 1,697,032 + Psyr_1510 0.65 -0.2
Or see this region's nucleotide sequence