Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS24435

Experiment: p-Coumaric (C) and Ammonium chloride (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) and Ammonium chloride (N); with MOPS
5,473,878	+				+0.4
5,473,879	-				-2.4
5,473,879	-				-1.5
5,473,954	+		PFLU_RS24430	0.11	+2.0
5,474,157	+		PFLU_RS24430	0.41	-0.3
5,474,157	+		PFLU_RS24430	0.41	+0.5
5,474,157	+		PFLU_RS24430	0.41	+1.4
5,474,157	+		PFLU_RS24430	0.41	+0.6
5,474,158	-		PFLU_RS24430	0.41	+0.6
5,474,158	-		PFLU_RS24430	0.41	+1.3
5,474,158	-		PFLU_RS24430	0.41	+0.7
5,474,158	-		PFLU_RS24430	0.41	-0.2
5,474,158	-		PFLU_RS24430	0.41	+0.5
5,474,265	+		PFLU_RS24430	0.57	+0.5
5,474,265	+		PFLU_RS24430	0.57	-0.0
5,474,265	+		PFLU_RS24430	0.57	+0.5
5,474,265	+		PFLU_RS24430	0.57	+0.8
5,474,266	-		PFLU_RS24430	0.57	+1.1
5,474,266	-		PFLU_RS24430	0.57	+0.8
5,474,266	-		PFLU_RS24430	0.57	+1.1
5,474,382	+		PFLU_RS24430	0.74	-0.3
5,474,382	+		PFLU_RS24430	0.74	+0.8
5,474,383	-		PFLU_RS24430	0.74	+0.8
5,474,383	-		PFLU_RS24430	0.74	+0.9
5,474,383	-		PFLU_RS24430	0.74	+0.8
5,474,427	+		PFLU_RS24430	0.80	+0.9
5,474,427	+		PFLU_RS24430	0.80	+2.0
5,474,427	+		PFLU_RS24430	0.80	-0.2
5,474,427	+		PFLU_RS24430	0.80	+1.8
5,474,428	-		PFLU_RS24430	0.81	+0.9
5,474,428	-		PFLU_RS24430	0.81	+0.7
5,474,428	-		PFLU_RS24430	0.81	+0.9
5,474,428	-		PFLU_RS24430	0.81	+0.1
5,474,428	-		PFLU_RS24430	0.81	+0.3
5,474,428	-		PFLU_RS24430	0.81	-0.6
5,474,428	-		PFLU_RS24430	0.81	+0.4
5,474,485	+		PFLU_RS24430	0.89	+1.0
5,474,485	+		PFLU_RS24430	0.89	+1.3
5,474,485	+		PFLU_RS24430	0.89	+1.4
5,474,486	-		PFLU_RS24430	0.89	+0.8
5,474,487	+		PFLU_RS24430	0.89	+1.0
5,474,487	+		PFLU_RS24430	0.89	-0.9
5,474,488	-		PFLU_RS24430	0.89	+0.9
5,474,488	-		PFLU_RS24430	0.89	+0.5
5,474,488	-		PFLU_RS24430	0.89	+0.7
5,474,488	-		PFLU_RS24430	0.89	+0.7
5,474,506	-				+1.1
5,474,576	-				+0.1
5,474,608	+				+0.1
5,474,608	+				-1.0
5,474,609	-				+0.3
5,474,609	-				-0.1
5,474,609	-				-0.6
5,474,631	+				+1.0
5,474,631	+				+0.8
5,474,632	-				+0.0
5,474,672	+				-0.1
5,474,672	+				-0.0
5,474,673	-				+1.4
5,474,673	-				-0.0
5,474,673	-				+0.3
5,474,673	-				-0.0
5,474,694	+				-0.3
5,474,694	+				-0.6
5,474,695	-				+0.9
5,474,696	+				-1.2
5,474,696	+				+0.4
5,474,696	+				-0.7
5,474,696	+				-0.3
5,474,696	+				-0.7
5,474,696	+				+0.2
5,474,696	+				+1.3
5,474,697	-				-1.2
5,474,697	-				-2.0
5,474,697	-				-0.4
5,474,697	-				-0.2
5,474,697	-				+0.7
5,474,697	-				-1.1
5,474,697	-				-2.2
5,474,697	-				-0.3
5,474,697	-				-0.1
5,474,697	-				-1.8
5,474,697	-				-0.7
5,474,697	-				-1.6
5,474,697	-				+0.3
5,474,697	-				+0.2
5,474,697	-				-0.6
5,474,713	+				+0.5
5,474,713	+				-0.5
5,474,713	+				-0.6
5,474,714	-				-0.1
5,474,714	-				+0.0
5,474,714	-				+0.5
5,474,714	-				+0.7
5,474,745	+				+0.5
5,474,745	+				-2.0
5,474,745	+				+0.1
5,474,745	+				-0.3
5,474,745	+				-0.0
5,474,746	-				+0.7
5,474,746	-				-0.5
5,474,746	-				-0.3
5,474,746	-				-0.3
5,474,746	-				-0.2
5,474,746	-				-0.0
5,474,746	-				-1.3
5,474,746	-				+0.1
5,474,747	+				-0.1
5,474,747	+				-0.1
5,474,747	+				+0.2
5,474,747	+				+0.6
5,474,747	+				+0.2
5,474,747	+				-0.1
5,474,747	+				-1.9
5,474,747	+				+0.3
5,474,747	+				+0.1
5,474,747	+				-1.3
5,474,747	+				-2.1
5,474,747	+				-0.6
5,474,747	+				+0.2
5,474,747	+				-0.8
5,474,747	+				-0.4
5,474,747	+				-0.3
5,474,748	-				+0.0
5,474,748	-				-2.5
5,474,748	-				-2.0
5,474,748	-				+0.7
5,474,748	-				-1.1
5,474,748	-				-1.4
5,474,748	-				-0.7
5,474,748	-				+0.5
5,474,748	-				+0.0
5,474,748	-				-0.7
5,474,748	-				+1.1
5,474,748	-				+1.5
5,474,748	-				-0.3
5,474,748	-				-1.2
5,474,748	-				-2.4
5,474,748	-				-0.1
5,474,748	-				-2.0
5,474,748	-				-0.2
5,474,748	-				+0.3
5,474,748	-				-0.2
5,474,748	-				-1.4
5,474,748	-				-1.1
5,474,756	+				-1.0
5,474,756	+				-1.0
5,474,756	+				+2.2
5,474,756	+				+0.5
5,474,756	+				+0.5
5,474,756	+				-0.9
5,474,756	+				+0.2
5,474,757	-				-1.0
5,474,757	-				-1.6
5,474,757	-				-0.8
5,474,757	-				+0.3
5,474,757	-				-0.1
5,474,757	-				-0.8
5,474,791	+				-0.8
5,474,791	+				+0.8
5,474,791	+				+0.4
5,474,791	+				+0.5
5,474,824	-				-0.6
5,474,847	-				-1.4
5,474,847	-				-1.7
5,474,847	-				-0.3
5,474,885	+				-0.4
5,474,885	+				+1.3
5,474,885	+				-1.5
5,474,885	+				-0.6
5,474,885	+				+1.1
5,474,885	+				-0.2
5,474,886	-				-1.1
5,474,886	-				+1.3
5,474,886	-				+0.3
5,474,886	-				-0.7
5,474,886	-				-1.1
5,474,914	+				-0.5
5,474,915	-				-1.2
5,474,915	-				-0.7
5,474,930	+				-0.0
5,474,936	-				-1.0
5,474,959	+		PFLU_RS24435	0.10	-0.3
5,474,959	+		PFLU_RS24435	0.10	-0.3
5,474,959	+		PFLU_RS24435	0.10	-0.3
5,474,960	-		PFLU_RS24435	0.10	-0.9
5,474,960	-		PFLU_RS24435	0.10	+0.0
5,474,960	-		PFLU_RS24435	0.10	-0.3
5,474,969	+		PFLU_RS24435	0.11	+0.3
5,474,969	+		PFLU_RS24435	0.11	-0.2
5,474,969	+		PFLU_RS24435	0.11	+0.3
5,474,969	+		PFLU_RS24435	0.11	+0.3
5,474,969	+		PFLU_RS24435	0.11	+0.3
5,474,969	+		PFLU_RS24435	0.11	-0.4
5,474,969	+		PFLU_RS24435	0.11	+0.5
5,474,970	-		PFLU_RS24435	0.11	+0.7
5,474,970	-		PFLU_RS24435	0.11	-0.3
5,474,970	-		PFLU_RS24435	0.11	-1.4
5,474,970	-		PFLU_RS24435	0.11	-0.6
5,474,970	-		PFLU_RS24435	0.11	-0.6
5,474,970	-		PFLU_RS24435	0.11	+0.4
5,475,054	+		PFLU_RS24435	0.15	-0.3
5,475,054	+		PFLU_RS24435	0.15	-1.4
5,475,055	-		PFLU_RS24435	0.15	+0.2
5,475,055	-		PFLU_RS24435	0.15	-0.9
5,475,055	-		PFLU_RS24435	0.15	-0.4
5,475,055	-		PFLU_RS24435	0.15	-0.8
5,475,121	+		PFLU_RS24435	0.18	-0.7
5,475,121	+		PFLU_RS24435	0.18	+0.2
5,475,121	+		PFLU_RS24435	0.18	+1.6
5,475,122	-		PFLU_RS24435	0.19	-0.4
5,475,130	+		PFLU_RS24435	0.19	-0.6
5,475,130	+		PFLU_RS24435	0.19	+0.2
5,475,130	+		PFLU_RS24435	0.19	+0.3
5,475,130	+		PFLU_RS24435	0.19	-0.8
5,475,130	+		PFLU_RS24435	0.19	+0.7
5,475,130	+		PFLU_RS24435	0.19	-0.0
5,475,130	+		PFLU_RS24435	0.19	+0.9
5,475,131	-		PFLU_RS24435	0.19	-0.2
5,475,131	-		PFLU_RS24435	0.19	-1.0
5,475,131	-		PFLU_RS24435	0.19	-0.3
5,475,373	+		PFLU_RS24435	0.31	-0.1
5,475,373	+		PFLU_RS24435	0.31	-0.4
5,475,373	+		PFLU_RS24435	0.31	+0.1
5,475,373	+		PFLU_RS24435	0.31	-1.0
5,475,374	-		PFLU_RS24435	0.31	+0.4
5,475,374	-		PFLU_RS24435	0.31	+0.5
5,475,374	-		PFLU_RS24435	0.31	+1.5
5,475,374	-		PFLU_RS24435	0.31	+0.4
5,475,426	+		PFLU_RS24435	0.34	+0.3
5,475,454	+		PFLU_RS24435	0.36	+1.2
5,475,454	+		PFLU_RS24435	0.36	-0.3
5,475,455	-		PFLU_RS24435	0.36	+0.3
5,475,455	-		PFLU_RS24435	0.36	+0.2
5,475,578	+		PFLU_RS24435	0.42	-0.2
5,475,578	+		PFLU_RS24435	0.42	+0.4
5,475,578	+		PFLU_RS24435	0.42	+0.6
5,475,579	-		PFLU_RS24435	0.42	-0.5
5,475,579	-		PFLU_RS24435	0.42	-0.0
5,475,579	-		PFLU_RS24435	0.42	+0.9
5,475,579	-		PFLU_RS24435	0.42	+0.5
5,475,582	+		PFLU_RS24435	0.42	-0.5
5,475,582	+		PFLU_RS24435	0.42	-0.9
5,475,583	-		PFLU_RS24435	0.42	-0.5
5,475,583	-		PFLU_RS24435	0.42	+0.6
5,475,583	-		PFLU_RS24435	0.42	-1.4
5,475,583	-		PFLU_RS24435	0.42	-2.4
5,475,583	-		PFLU_RS24435	0.42	-2.2
5,475,583	-		PFLU_RS24435	0.42	+0.8
5,475,628	+		PFLU_RS24435	0.44	-0.7
5,475,628	+		PFLU_RS24435	0.44	+0.5
5,475,628	+		PFLU_RS24435	0.44	+0.4
5,475,628	+		PFLU_RS24435	0.44	+0.7
5,475,628	+		PFLU_RS24435	0.44	-0.2
5,475,628	+		PFLU_RS24435	0.44	-3.1
5,475,628	+		PFLU_RS24435	0.44	-0.7
5,475,628	+		PFLU_RS24435	0.44	+1.2
5,475,628	+		PFLU_RS24435	0.44	-1.1
5,475,629	-		PFLU_RS24435	0.45	-1.5
5,475,629	-		PFLU_RS24435	0.45	+0.3
5,475,629	-		PFLU_RS24435	0.45	-0.8
5,475,629	-		PFLU_RS24435	0.45	-0.5
5,475,629	-		PFLU_RS24435	0.45	+0.6
5,475,640	-		PFLU_RS24435	0.45	+1.2
5,475,660	+		PFLU_RS24435	0.46	+0.2
5,475,660	+		PFLU_RS24435	0.46	-0.0
5,475,661	-		PFLU_RS24435	0.46	+0.5
5,475,661	-		PFLU_RS24435	0.46	+0.3
5,475,667	-		PFLU_RS24435	0.46	-0.1
5,475,697	+		PFLU_RS24435	0.48	+0.7
5,475,697	+		PFLU_RS24435	0.48	+0.6
5,475,697	+		PFLU_RS24435	0.48	-0.0
5,475,697	+		PFLU_RS24435	0.48	-0.2
5,475,697	+		PFLU_RS24435	0.48	+1.8
5,475,697	+		PFLU_RS24435	0.48	-0.8
5,475,697	+		PFLU_RS24435	0.48	-1.2
5,475,698	-		PFLU_RS24435	0.48	-1.2
5,475,698	-		PFLU_RS24435	0.48	+0.5
5,475,698	-		PFLU_RS24435	0.48	+0.3
5,475,706	-		PFLU_RS24435	0.48	+0.3
5,475,706	-		PFLU_RS24435	0.48	+1.2
5,475,712	+		PFLU_RS24435	0.49	-0.2
5,475,713	-		PFLU_RS24435	0.49	+0.1
5,475,713	-		PFLU_RS24435	0.49	+0.1
5,475,853	+		PFLU_RS24435	0.56	+0.1
5,475,853	+		PFLU_RS24435	0.56	-0.9
5,475,886	+		PFLU_RS24435	0.58	-0.4
5,475,886	+		PFLU_RS24435	0.58	+1.1
5,475,887	-		PFLU_RS24435	0.58	-0.6
5,475,887	-		PFLU_RS24435	0.58	+0.1
5,475,887	-		PFLU_RS24435	0.58	-0.4
5,475,887	-		PFLU_RS24435	0.58	-0.2
5,475,887	-		PFLU_RS24435	0.58	-0.5
5,475,887	-		PFLU_RS24435	0.58	+1.4
5,475,887	-		PFLU_RS24435	0.58	-0.9
5,475,887	-		PFLU_RS24435	0.58	+1.4
5,475,897	+		PFLU_RS24435	0.58	-2.1
5,475,897	+		PFLU_RS24435	0.58	-0.6
5,475,897	+		PFLU_RS24435	0.58	-0.9
5,475,897	+		PFLU_RS24435	0.58	-0.4
5,475,897	+		PFLU_RS24435	0.58	+0.4
5,475,898	-		PFLU_RS24435	0.58	+0.4
5,475,898	-		PFLU_RS24435	0.58	-1.6
5,475,898	-		PFLU_RS24435	0.58	-0.7
5,475,898	-		PFLU_RS24435	0.58	+0.7
5,475,898	-		PFLU_RS24435	0.58	-0.1
5,476,006	+		PFLU_RS24435	0.64	+1.0
5,476,006	+		PFLU_RS24435	0.64	+0.5
5,476,006	+		PFLU_RS24435	0.64	+1.5
5,476,006	+		PFLU_RS24435	0.64	+0.3
5,476,006	+		PFLU_RS24435	0.64	-1.9
5,476,006	+		PFLU_RS24435	0.64	-0.9
5,476,006	+		PFLU_RS24435	0.64	+0.0
5,476,006	+		PFLU_RS24435	0.64	+0.4
5,476,007	-		PFLU_RS24435	0.64	+0.3
5,476,007	-		PFLU_RS24435	0.64	-0.2
5,476,007	-		PFLU_RS24435	0.64	+0.7
5,476,008	+		PFLU_RS24435	0.64	+1.2
5,476,008	+		PFLU_RS24435	0.64	+1.2
5,476,008	+		PFLU_RS24435	0.64	-0.1
5,476,009	-		PFLU_RS24435	0.64	-0.9
5,476,009	-		PFLU_RS24435	0.64	+0.9
5,476,009	-		PFLU_RS24435	0.64	-0.3
5,476,039	+		PFLU_RS24435	0.66	-0.9
5,476,039	+		PFLU_RS24435	0.66	-2.4
5,476,040	-		PFLU_RS24435	0.66	-0.4
5,476,040	-		PFLU_RS24435	0.66	+1.0
5,476,096	+		PFLU_RS24435	0.68	-0.6
5,476,096	+		PFLU_RS24435	0.68	+1.5
5,476,097	-		PFLU_RS24435	0.69	+0.5
5,476,097	-		PFLU_RS24435	0.69	+0.2
5,476,103	-		PFLU_RS24435	0.69	+0.8
5,476,159	+		PFLU_RS24435	0.72	+2.0
5,476,159	+		PFLU_RS24435	0.72	+1.0
5,476,160	-		PFLU_RS24435	0.72	-0.2
5,476,160	-		PFLU_RS24435	0.72	+0.4
5,476,160	-		PFLU_RS24435	0.72	+0.4
5,476,160	-		PFLU_RS24435	0.72	-2.0
5,476,160	-		PFLU_RS24435	0.72	+0.6
5,476,281	+		PFLU_RS24435	0.78	-1.8
5,476,281	+		PFLU_RS24435	0.78	-0.5
5,476,281	+		PFLU_RS24435	0.78	+0.1
5,476,281	+		PFLU_RS24435	0.78	+0.1
5,476,282	-		PFLU_RS24435	0.78	-0.9
5,476,291	+		PFLU_RS24435	0.78	-0.6
5,476,292	-		PFLU_RS24435	0.79	-0.3
5,476,292	-		PFLU_RS24435	0.79	-0.3
5,476,312	+		PFLU_RS24435	0.80	+0.8
5,476,312	+		PFLU_RS24435	0.80	+0.1
5,476,312	+		PFLU_RS24435	0.80	+0.3
5,476,312	+		PFLU_RS24435	0.80	+0.9
5,476,312	+		PFLU_RS24435	0.80	+1.3
5,476,312	+		PFLU_RS24435	0.80	-1.2
5,476,312	+		PFLU_RS24435	0.80	+0.0
5,476,312	+		PFLU_RS24435	0.80	+1.0
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