Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS14560

Experiment: p-Coumaric (C) and Ammonium chloride (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) and Ammonium chloride (N); with MOPS
3,253,991	+		PFLU_RS14555	0.39	-2.1
3,253,991	+		PFLU_RS14555	0.39	+0.5
3,253,991	+		PFLU_RS14555	0.39	-0.6
3,253,991	+		PFLU_RS14555	0.39	+0.1
3,253,991	+		PFLU_RS14555	0.39	-0.0
3,253,992	-		PFLU_RS14555	0.39	-2.5
3,253,992	-		PFLU_RS14555	0.39	+0.4
3,253,992	-		PFLU_RS14555	0.39	-2.5
3,253,992	-		PFLU_RS14555	0.39	+0.1
3,253,992	-		PFLU_RS14555	0.39	-0.9
3,254,238	-		PFLU_RS14555	0.57	+0.6
3,254,238	-		PFLU_RS14555	0.57	-1.1
3,254,238	-		PFLU_RS14555	0.57	-1.4
3,254,468	+		PFLU_RS14555	0.74	+0.4
3,254,468	+		PFLU_RS14555	0.74	+0.3
3,254,517	+		PFLU_RS14555	0.77	-1.5
3,254,518	-		PFLU_RS14555	0.77	-1.0
3,254,554	+		PFLU_RS14555	0.80	-1.4
3,254,554	+		PFLU_RS14555	0.80	+0.2
3,254,554	+		PFLU_RS14555	0.80	-1.3
3,254,559	+		PFLU_RS14555	0.80	-0.9
3,254,559	+		PFLU_RS14555	0.80	-1.2
3,254,559	+		PFLU_RS14555	0.80	-0.0
3,254,559	+		PFLU_RS14555	0.80	-0.3
3,254,559	+		PFLU_RS14555	0.80	+0.0
3,254,560	-		PFLU_RS14555	0.81	+0.2
3,254,560	-		PFLU_RS14555	0.81	+0.5
3,254,560	-		PFLU_RS14555	0.81	-1.5
3,254,560	-		PFLU_RS14555	0.81	-0.6
3,254,560	-		PFLU_RS14555	0.81	+0.1
3,254,560	-		PFLU_RS14555	0.81	-0.3
3,254,560	-		PFLU_RS14555	0.81	+0.2
3,254,560	-		PFLU_RS14555	0.81	-2.0
3,254,560	-		PFLU_RS14555	0.81	+0.3
3,254,560	-		PFLU_RS14555	0.81	+0.4
3,254,560	-		PFLU_RS14555	0.81	-0.4
3,254,560	-		PFLU_RS14555	0.81	-0.4
3,254,560	-		PFLU_RS14555	0.81	-0.9
3,254,777	-				-1.5
3,254,887	+				+0.9
3,254,888	-				+0.0
3,254,888	-				+0.1
3,255,044	+		PFLU_RS14560	0.22	-0.3
3,255,044	+		PFLU_RS14560	0.22	-0.5
3,255,044	+		PFLU_RS14560	0.22	+0.1
3,255,045	-		PFLU_RS14560	0.22	-0.5
3,255,045	-		PFLU_RS14560	0.22	-0.2
3,255,045	-		PFLU_RS14560	0.22	-0.2
3,255,045	-		PFLU_RS14560	0.22	-0.3
3,255,045	-		PFLU_RS14560	0.22	+0.5
3,255,045	-		PFLU_RS14560	0.22	+0.1
3,255,364	-		PFLU_RS14560	0.53	+0.1
3,255,519	-		PFLU_RS14560	0.69	+1.2
3,255,696	+		PFLU_RS14560	0.86	-0.8
3,255,697	-		PFLU_RS14560	0.87	+0.6
3,255,744	-				+0.7
3,255,744	-				+0.6
3,255,803	+				+1.1
3,255,804	-				+0.1
3,255,804	-				+0.1
3,255,804	-				-0.6
3,255,804	-				+0.6
3,255,812	-				+1.1
3,255,814	+				+0.5
3,255,814	+				+0.3
3,255,815	-				+0.5
3,255,815	-				+0.3
3,255,872	-				-1.2
3,255,879	+				-0.6
3,255,919	-				-1.0
3,255,938	+				-0.6
3,255,938	+				+1.0
3,255,962	-				+0.6
3,255,972	+				-0.7
3,255,972	+				-0.2
3,255,972	+				+0.6
3,255,972	+				-0.9
3,255,972	+				-1.0
3,255,972	+				-1.2
3,255,972	+				+1.5
3,255,972	+				+0.1
3,255,972	+				+0.7
3,255,972	+				-0.9
3,255,972	+				+0.1
3,255,972	+				+0.2
3,255,972	+				-0.1
3,255,972	+				-0.8
3,255,972	+				-0.5
3,255,972	+				-0.4
3,255,972	+				-0.2
3,255,972	+				+0.7
3,255,972	+				+1.1
3,255,972	+				+0.2
3,255,972	+				+1.0
3,255,972	+				+0.2
3,255,972	+				+1.0
3,255,972	+				+0.3
3,255,972	+				+0.5
3,255,972	+				-0.4
3,255,972	+				+0.7
3,255,972	+				-0.3
3,255,972	+				-0.6
3,255,972	+				+0.1
3,255,972	+				-0.5
3,255,972	+				-0.5
3,255,972	+				+0.3
3,255,972	+				-0.1
3,255,973	-				+0.0
3,255,973	-				-0.9
3,255,973	-				-0.1
3,255,973	-				+0.2
3,255,973	-				+0.5
3,255,973	-				+0.2
3,255,973	-				+0.4
3,255,973	-				+1.4
3,255,973	-				+1.0
3,255,973	-				-0.5
3,255,973	-				-0.1
3,255,973	-				-0.3
3,255,973	-				-0.7
3,255,973	-				-0.9
3,255,973	-				+0.3
3,255,973	-				-0.2
3,255,973	-				-1.1
3,255,973	-				+0.5
3,255,973	-				+0.2
3,255,973	-				-0.2
3,255,973	-				+0.2
3,255,973	-				+1.1
3,255,973	-				+0.1
3,255,973	-				-0.2
3,255,973	-				-0.6
3,255,973	-				+0.3
3,255,973	-				+0.4
3,255,973	-				+0.5
3,255,973	-				-1.2
3,255,973	-				-1.9
3,255,987	+				+0.2
3,256,022	-				+0.0
3,256,022	-				+0.5
3,256,022	-				+0.6
3,256,061	-				-0.3
3,256,135	+		PFLU_RS14565	0.14	-0.3
3,256,157	+		PFLU_RS14565	0.17	+0.3
3,256,158	-		PFLU_RS14565	0.17	+1.2
3,256,158	-		PFLU_RS14565	0.17	-0.3
3,256,170	+		PFLU_RS14565	0.18	-0.9
3,256,170	+		PFLU_RS14565	0.18	-1.0
3,256,170	+		PFLU_RS14565	0.18	-0.6
3,256,171	-		PFLU_RS14565	0.18	+0.8
3,256,171	-		PFLU_RS14565	0.18	-1.0
3,256,171	-		PFLU_RS14565	0.18	+0.1
3,256,171	-		PFLU_RS14565	0.18	+0.2
3,256,175	+		PFLU_RS14565	0.18	+0.2
3,256,176	-		PFLU_RS14565	0.19	+1.0
3,256,176	-		PFLU_RS14565	0.19	-1.2
3,256,209	+		PFLU_RS14565	0.22	-0.4
3,256,209	+		PFLU_RS14565	0.22	-1.7
3,256,209	+		PFLU_RS14565	0.22	-0.7
3,256,209	+		PFLU_RS14565	0.22	-0.6
3,256,209	+		PFLU_RS14565	0.22	+0.0
3,256,209	+		PFLU_RS14565	0.22	+0.5
3,256,209	+		PFLU_RS14565	0.22	+0.5
3,256,209	+		PFLU_RS14565	0.22	+1.1
3,256,209	+		PFLU_RS14565	0.22	-0.3
3,256,209	+		PFLU_RS14565	0.22	-0.3
3,256,210	-		PFLU_RS14565	0.22	+0.1
3,256,210	-		PFLU_RS14565	0.22	-1.0
3,256,210	-		PFLU_RS14565	0.22	-0.1
3,256,210	-		PFLU_RS14565	0.22	-1.5
3,256,210	-		PFLU_RS14565	0.22	-0.3
3,256,210	-		PFLU_RS14565	0.22	+0.0
3,256,210	-		PFLU_RS14565	0.22	-1.7
3,256,210	-		PFLU_RS14565	0.22	+0.4
3,256,236	+		PFLU_RS14565	0.25	-0.1
3,256,237	-		PFLU_RS14565	0.25	-0.8
3,256,262	+		PFLU_RS14565	0.28	+0.8
3,256,262	+		PFLU_RS14565	0.28	+0.1
3,256,263	-		PFLU_RS14565	0.28	+0.4
3,256,522	+		PFLU_RS14565	0.56	-0.2
3,256,522	+		PFLU_RS14565	0.56	-0.6
3,256,523	-		PFLU_RS14565	0.56	-0.4
3,256,523	-		PFLU_RS14565	0.56	+0.4
3,256,567	+		PFLU_RS14565	0.60	+0.0
3,256,567	+		PFLU_RS14565	0.60	+0.2
3,256,567	+		PFLU_RS14565	0.60	+0.1
3,256,568	-		PFLU_RS14565	0.61	+0.3
3,256,568	-		PFLU_RS14565	0.61	-0.2
3,256,568	-		PFLU_RS14565	0.61	+1.3
3,256,568	-		PFLU_RS14565	0.61	-0.4
3,256,609	+		PFLU_RS14565	0.65	+0.2
3,256,609	+		PFLU_RS14565	0.65	+0.0
3,256,765	+		PFLU_RS14565	0.82	+0.1
3,256,765	+		PFLU_RS14565	0.82	-0.1
3,256,766	-		PFLU_RS14565	0.82	-0.8
3,256,766	-		PFLU_RS14565	0.82	+1.0
3,256,766	-		PFLU_RS14565	0.82	-0.1
3,256,766	-		PFLU_RS14565	0.82	-0.2