Experiment: 2'-Deoxycytidine 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24165 and BWI76_RS24170 are separated by 193 nucleotides BWI76_RS24170 and BWI76_RS24175 are separated by 67 nucleotides
BWI76_RS24165: BWI76_RS24165 - lytic murein transglycosylase, at 5,037,349 to 5,038,434
_RS24165
BWI76_RS24170: BWI76_RS24170 - nucleoside permease, at 5,038,628 to 5,039,884
_RS24170
BWI76_RS24175: BWI76_RS24175 - ornithine decarboxylase, at 5,039,952 to 5,042,090
_RS24175
Position (kb)
5038
5039
5040 Strain fitness (log2 ratio)
-1
0
1
2 at 5037.697 kb on - strand at 5037.698 kb on - strand, within BWI76_RS24165 at 5037.884 kb on + strand, within BWI76_RS24165 at 5037.884 kb on + strand, within BWI76_RS24165 at 5037.892 kb on - strand, within BWI76_RS24165 at 5037.892 kb on - strand, within BWI76_RS24165 at 5037.892 kb on - strand, within BWI76_RS24165 at 5037.892 kb on - strand, within BWI76_RS24165 at 5037.892 kb on - strand, within BWI76_RS24165 at 5038.068 kb on + strand, within BWI76_RS24165 at 5038.076 kb on - strand, within BWI76_RS24165 at 5038.190 kb on + strand, within BWI76_RS24165 at 5038.198 kb on - strand, within BWI76_RS24165 at 5038.222 kb on - strand, within BWI76_RS24165 at 5038.296 kb on + strand, within BWI76_RS24165 at 5038.373 kb on - strand at 5038.400 kb on - strand at 5038.406 kb on - strand at 5038.486 kb on + strand at 5038.486 kb on + strand at 5038.730 kb on - strand at 5038.754 kb on + strand, within BWI76_RS24170 at 5038.764 kb on - strand, within BWI76_RS24170 at 5038.963 kb on + strand, within BWI76_RS24170 at 5038.971 kb on - strand, within BWI76_RS24170 at 5039.060 kb on - strand, within BWI76_RS24170 at 5039.110 kb on + strand, within BWI76_RS24170 at 5039.133 kb on + strand, within BWI76_RS24170 at 5039.139 kb on - strand, within BWI76_RS24170 at 5039.141 kb on - strand, within BWI76_RS24170 at 5039.141 kb on - strand, within BWI76_RS24170 at 5039.154 kb on + strand, within BWI76_RS24170 at 5039.162 kb on - strand, within BWI76_RS24170 at 5039.162 kb on - strand, within BWI76_RS24170 at 5039.490 kb on - strand, within BWI76_RS24170 at 5039.566 kb on + strand, within BWI76_RS24170 at 5039.576 kb on + strand at 5039.830 kb on + strand at 5039.838 kb on - strand at 5039.865 kb on - strand at 5039.970 kb on + strand at 5039.970 kb on + strand at 5039.981 kb on + strand at 5040.016 kb on + strand at 5040.301 kb on - strand, within BWI76_RS24175 at 5040.313 kb on - strand, within BWI76_RS24175 at 5040.675 kb on - strand, within BWI76_RS24175 at 5040.676 kb on - strand, within BWI76_RS24175 at 5040.703 kb on - strand, within BWI76_RS24175 at 5040.857 kb on + strand, within BWI76_RS24175
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxycytidine 10 mM (C) remove 5,037,697 - -1.3 5,037,698 - BWI76_RS24165 0.32 -1.0 5,037,884 + BWI76_RS24165 0.49 -1.0 5,037,884 + BWI76_RS24165 0.49 +0.5 5,037,892 - BWI76_RS24165 0.50 -0.1 5,037,892 - BWI76_RS24165 0.50 +2.3 5,037,892 - BWI76_RS24165 0.50 -1.3 5,037,892 - BWI76_RS24165 0.50 +0.2 5,037,892 - BWI76_RS24165 0.50 +0.6 5,038,068 + BWI76_RS24165 0.66 +0.0 5,038,076 - BWI76_RS24165 0.67 +1.2 5,038,190 + BWI76_RS24165 0.77 -0.5 5,038,198 - BWI76_RS24165 0.78 +0.0 5,038,222 - BWI76_RS24165 0.80 -0.6 5,038,296 + BWI76_RS24165 0.87 +0.3 5,038,373 - -0.1 5,038,400 - -0.1 5,038,406 - +0.1 5,038,486 + -1.3 5,038,486 + -0.4 5,038,730 - +0.5 5,038,754 + BWI76_RS24170 0.10 +0.8 5,038,764 - BWI76_RS24170 0.11 +1.6 5,038,963 + BWI76_RS24170 0.27 +1.1 5,038,971 - BWI76_RS24170 0.27 -0.9 5,039,060 - BWI76_RS24170 0.34 +1.1 5,039,110 + BWI76_RS24170 0.38 +0.8 5,039,133 + BWI76_RS24170 0.40 +1.0 5,039,139 - BWI76_RS24170 0.41 +2.2 5,039,141 - BWI76_RS24170 0.41 +0.5 5,039,141 - BWI76_RS24170 0.41 -0.2 5,039,154 + BWI76_RS24170 0.42 +0.7 5,039,162 - BWI76_RS24170 0.42 +1.2 5,039,162 - BWI76_RS24170 0.42 +1.2 5,039,490 - BWI76_RS24170 0.69 +2.0 5,039,566 + BWI76_RS24170 0.75 +1.1 5,039,576 + +0.0 5,039,830 + +1.1 5,039,838 - +0.5 5,039,865 - +1.1 5,039,970 + +0.8 5,039,970 + +0.4 5,039,981 + -0.1 5,040,016 + -0.8 5,040,301 - BWI76_RS24175 0.16 -0.4 5,040,313 - BWI76_RS24175 0.17 +0.5 5,040,675 - BWI76_RS24175 0.34 -0.0 5,040,676 - BWI76_RS24175 0.34 +0.1 5,040,703 - BWI76_RS24175 0.35 -0.1 5,040,857 + BWI76_RS24175 0.42 -0.5
Or see this region's nucleotide sequence