Experiment: 2'-Deoxycytidine 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21985 and BWI76_RS21990 are separated by 250 nucleotides BWI76_RS21990 and BWI76_RS21995 are separated by 149 nucleotides BWI76_RS21995 and BWI76_RS22000 are separated by 9 nucleotides
BWI76_RS21985: BWI76_RS21985 - acetaldehyde dehydrogenase (EC 1.2.1.3) <small>(from data)</small>, at 4,592,938 to 4,594,458
_RS21985
BWI76_RS21990: BWI76_RS21990 - ATPase AAA, at 4,594,709 to 4,596,493
_RS21990
BWI76_RS21995: BWI76_RS21995 - transcriptional regulator, at 4,596,643 to 4,596,942
_RS21995
BWI76_RS22000: BWI76_RS22000 - hypothetical protein, at 4,596,952 to 4,597,473
_RS22000
Position (kb) 4594
4595
4596
4597 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 4593.709 kb on + strand, within BWI76_RS21985 at 4593.709 kb on + strand, within BWI76_RS21985 at 4593.717 kb on - strand, within BWI76_RS21985 at 4593.717 kb on - strand, within BWI76_RS21985 at 4593.805 kb on + strand, within BWI76_RS21985 at 4593.864 kb on + strand, within BWI76_RS21985 at 4593.872 kb on - strand, within BWI76_RS21985 at 4594.120 kb on - strand, within BWI76_RS21985 at 4594.405 kb on + strand at 4594.411 kb on + strand at 4594.443 kb on + strand at 4594.456 kb on - strand at 4594.505 kb on + strand at 4594.712 kb on - strand at 4595.245 kb on + strand, within BWI76_RS21990 at 4595.253 kb on - strand, within BWI76_RS21990 at 4595.288 kb on - strand, within BWI76_RS21990 at 4595.430 kb on + strand, within BWI76_RS21990 at 4595.604 kb on + strand at 4595.649 kb on - strand, within BWI76_RS21990 at 4595.693 kb on + strand, within BWI76_RS21990 at 4595.758 kb on - strand, within BWI76_RS21990 at 4595.824 kb on - strand, within BWI76_RS21990 at 4595.831 kb on + strand, within BWI76_RS21990 at 4595.942 kb on - strand, within BWI76_RS21990 at 4596.059 kb on + strand, within BWI76_RS21990 at 4596.086 kb on + strand, within BWI76_RS21990 at 4596.205 kb on - strand, within BWI76_RS21990 at 4596.225 kb on - strand, within BWI76_RS21990 at 4596.362 kb on - strand at 4596.438 kb on - strand at 4596.453 kb on + strand at 4596.585 kb on - strand at 4596.666 kb on + strand at 4596.708 kb on - strand, within BWI76_RS21995 at 4596.787 kb on + strand, within BWI76_RS21995 at 4596.857 kb on + strand, within BWI76_RS21995 at 4596.944 kb on - strand at 4596.956 kb on - strand at 4597.115 kb on + strand, within BWI76_RS22000 at 4597.164 kb on + strand, within BWI76_RS22000 at 4597.164 kb on + strand, within BWI76_RS22000 at 4597.164 kb on + strand, within BWI76_RS22000 at 4597.172 kb on - strand, within BWI76_RS22000 at 4597.172 kb on - strand, within BWI76_RS22000 at 4597.318 kb on + strand, within BWI76_RS22000 at 4597.339 kb on + strand, within BWI76_RS22000 at 4597.404 kb on - strand, within BWI76_RS22000 at 4597.475 kb on - strand at 4597.475 kb on - strand at 4597.493 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxycytidine 10 mM (C) remove 4,593,709 + BWI76_RS21985 0.51 -1.6 4,593,709 + BWI76_RS21985 0.51 -1.5 4,593,717 - BWI76_RS21985 0.51 -1.7 4,593,717 - BWI76_RS21985 0.51 -2.9 4,593,805 + BWI76_RS21985 0.57 -1.7 4,593,864 + BWI76_RS21985 0.61 -3.6 4,593,872 - BWI76_RS21985 0.61 -1.8 4,594,120 - BWI76_RS21985 0.78 -2.0 4,594,405 + -1.4 4,594,411 + -2.5 4,594,443 + -0.7 4,594,456 - -0.3 4,594,505 + -2.0 4,594,712 - -2.0 4,595,245 + BWI76_RS21990 0.30 -1.8 4,595,253 - BWI76_RS21990 0.30 -2.2 4,595,288 - BWI76_RS21990 0.32 -1.1 4,595,430 + BWI76_RS21990 0.40 -1.6 4,595,604 + +1.0 4,595,649 - BWI76_RS21990 0.53 -1.0 4,595,693 + BWI76_RS21990 0.55 -1.5 4,595,758 - BWI76_RS21990 0.59 -1.6 4,595,824 - BWI76_RS21990 0.62 -2.0 4,595,831 + BWI76_RS21990 0.63 -1.6 4,595,942 - BWI76_RS21990 0.69 -1.8 4,596,059 + BWI76_RS21990 0.76 -1.3 4,596,086 + BWI76_RS21990 0.77 -2.2 4,596,205 - BWI76_RS21990 0.84 -1.8 4,596,225 - BWI76_RS21990 0.85 -1.2 4,596,362 - -1.0 4,596,438 - -1.0 4,596,453 + -1.2 4,596,585 - -0.6 4,596,666 + -0.5 4,596,708 - BWI76_RS21995 0.22 +0.9 4,596,787 + BWI76_RS21995 0.48 -0.7 4,596,857 + BWI76_RS21995 0.71 -0.6 4,596,944 - -0.4 4,596,956 - +0.2 4,597,115 + BWI76_RS22000 0.31 +1.1 4,597,164 + BWI76_RS22000 0.41 -0.0 4,597,164 + BWI76_RS22000 0.41 +0.2 4,597,164 + BWI76_RS22000 0.41 +0.0 4,597,172 - BWI76_RS22000 0.42 -0.1 4,597,172 - BWI76_RS22000 0.42 -0.6 4,597,318 + BWI76_RS22000 0.70 +0.0 4,597,339 + BWI76_RS22000 0.74 +0.6 4,597,404 - BWI76_RS22000 0.87 +0.3 4,597,475 - -0.4 4,597,475 - -2.4 4,597,493 + +0.7
Or see this region's nucleotide sequence