Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS21810

Experiment: 2'-Deoxycytidine 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS21805 and BWI76_RS21810 are separated by 17 nucleotidesBWI76_RS21810 and BWI76_RS21815 are separated by 79 nucleotidesBWI76_RS21815 and BWI76_RS21820 are separated by 379 nucleotides BWI76_RS21805: BWI76_RS21805 - sodium-independent anion transporter, at 4,556,482 to 4,557,960 _RS21805 BWI76_RS21810: BWI76_RS21810 - universal stress protein, at 4,557,978 to 4,558,184 _RS21810 BWI76_RS21815: BWI76_RS21815 - hypothetical protein, at 4,558,264 to 4,558,470 _RS21815 BWI76_RS21820: BWI76_RS21820 - colicin D, at 4,558,850 to 4,559,116 _RS21820 Position (kb) 4557 4558 4559Strain fitness (log2 ratio) -2 -1 0 1 2 3at 4557.144 kb on + strand, within BWI76_RS21805at 4557.152 kb on - strand, within BWI76_RS21805at 4557.246 kb on + strand, within BWI76_RS21805at 4557.246 kb on + strand, within BWI76_RS21805at 4557.253 kb on + strand, within BWI76_RS21805at 4557.254 kb on - strand, within BWI76_RS21805at 4557.367 kb on - strand, within BWI76_RS21805at 4557.382 kb on + strand, within BWI76_RS21805at 4557.493 kb on + strand, within BWI76_RS21805at 4557.517 kb on + strand, within BWI76_RS21805at 4557.525 kb on - strand, within BWI76_RS21805at 4557.535 kb on - strand, within BWI76_RS21805at 4557.588 kb on + strand, within BWI76_RS21805at 4557.601 kb on - strand, within BWI76_RS21805at 4557.601 kb on - strand, within BWI76_RS21805at 4557.601 kb on - strand, within BWI76_RS21805at 4557.661 kb on - strand, within BWI76_RS21805at 4557.730 kb on - strand, within BWI76_RS21805at 4557.759 kb on - strand, within BWI76_RS21805at 4557.780 kb on - strand, within BWI76_RS21805at 4557.819 kb on + strandat 4557.855 kb on - strandat 4557.867 kb on - strandat 4557.881 kb on - strandat 4557.990 kb on + strandat 4558.060 kb on + strand, within BWI76_RS21810at 4558.072 kb on + strand, within BWI76_RS21810at 4558.231 kb on + strandat 4558.238 kb on + strandat 4558.324 kb on + strand, within BWI76_RS21815at 4558.333 kb on + strand, within BWI76_RS21815at 4558.351 kb on - strand, within BWI76_RS21815at 4558.353 kb on + strand, within BWI76_RS21815at 4558.361 kb on - strand, within BWI76_RS21815at 4558.376 kb on + strand, within BWI76_RS21815at 4558.376 kb on + strand, within BWI76_RS21815at 4558.384 kb on - strand, within BWI76_RS21815at 4558.384 kb on - strand, within BWI76_RS21815at 4558.469 kb on - strandat 4558.501 kb on - strandat 4558.661 kb on + strandat 4558.664 kb on - strandat 4558.669 kb on - strandat 4558.680 kb on - strandat 4558.696 kb on + strandat 4558.722 kb on - strandat 4558.732 kb on - strandat 4558.742 kb on - strandat 4558.767 kb on + strandat 4558.767 kb on + strandat 4558.767 kb on + strandat 4558.767 kb on + strandat 4558.775 kb on - strandat 4558.775 kb on - strandat 4558.777 kb on + strandat 4558.777 kb on + strandat 4558.780 kb on - strandat 4558.782 kb on + strandat 4558.782 kb on + strandat 4558.782 kb on + strandat 4558.782 kb on + strandat 4558.782 kb on + strandat 4558.782 kb on + strandat 4558.782 kb on + strandat 4558.782 kb on + strandat 4558.782 kb on + strandat 4558.782 kb on + strandat 4558.782 kb on + strandat 4558.787 kb on + strandat 4558.787 kb on + strandat 4558.787 kb on + strandat 4558.789 kb on - strandat 4558.790 kb on - strandat 4558.790 kb on - strandat 4558.790 kb on - strandat 4558.790 kb on - strandat 4558.790 kb on - strandat 4558.790 kb on - strandat 4558.790 kb on - strandat 4558.790 kb on - strandat 4558.790 kb on - strandat 4558.790 kb on - strandat 4558.790 kb on - strandat 4558.790 kb on - strandat 4558.795 kb on - strandat 4558.795 kb on - strandat 4558.795 kb on - strandat 4558.797 kb on + strandat 4558.797 kb on + strandat 4558.805 kb on - strandat 4558.808 kb on + strandat 4558.816 kb on - strandat 4558.816 kb on - strandat 4558.816 kb on - strandat 4558.816 kb on - strandat 4558.828 kb on - strandat 4558.837 kb on - strandat 4558.842 kb on + strandat 4558.856 kb on - strandat 4558.856 kb on - strandat 4558.886 kb on - strand, within BWI76_RS21820at 4558.886 kb on - strand, within BWI76_RS21820at 4558.886 kb on - strand, within BWI76_RS21820at 4558.886 kb on - strand, within BWI76_RS21820at 4558.886 kb on - strandat 4558.886 kb on - strand, within BWI76_RS21820at 4558.886 kb on - strand, within BWI76_RS21820at 4558.914 kb on - strand, within BWI76_RS21820at 4558.920 kb on - strand, within BWI76_RS21820at 4558.947 kb on - strand, within BWI76_RS21820at 4558.947 kb on - strand, within BWI76_RS21820at 4558.977 kb on - strand, within BWI76_RS21820at 4559.029 kb on - strand, within BWI76_RS21820at 4559.035 kb on - strand, within BWI76_RS21820at 4559.039 kb on - strand, within BWI76_RS21820

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Per-strain Table

Position Strand Gene LocusTag Fraction 2'-Deoxycytidine 10 mM (C)
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4,557,144 + BWI76_RS21805 0.45 -0.1
4,557,152 - BWI76_RS21805 0.45 -0.2
4,557,246 + BWI76_RS21805 0.52 +0.2
4,557,246 + BWI76_RS21805 0.52 +1.0
4,557,253 + BWI76_RS21805 0.52 -0.2
4,557,254 - BWI76_RS21805 0.52 +0.3
4,557,367 - BWI76_RS21805 0.60 -1.4
4,557,382 + BWI76_RS21805 0.61 +0.6
4,557,493 + BWI76_RS21805 0.68 -0.1
4,557,517 + BWI76_RS21805 0.70 +0.5
4,557,525 - BWI76_RS21805 0.71 +0.4
4,557,535 - BWI76_RS21805 0.71 +0.1
4,557,588 + BWI76_RS21805 0.75 -0.6
4,557,601 - BWI76_RS21805 0.76 +2.0
4,557,601 - BWI76_RS21805 0.76 -0.6
4,557,601 - BWI76_RS21805 0.76 +0.2
4,557,661 - BWI76_RS21805 0.80 +0.8
4,557,730 - BWI76_RS21805 0.84 -0.2
4,557,759 - BWI76_RS21805 0.86 +0.5
4,557,780 - BWI76_RS21805 0.88 +1.0
4,557,819 + -0.0
4,557,855 - -0.3
4,557,867 - -0.0
4,557,881 - -1.1
4,557,990 + +0.1
4,558,060 + BWI76_RS21810 0.40 -1.0
4,558,072 + BWI76_RS21810 0.45 -0.9
4,558,231 + -0.9
4,558,238 + -1.1
4,558,324 + BWI76_RS21815 0.29 -1.1
4,558,333 + BWI76_RS21815 0.33 +2.6
4,558,351 - BWI76_RS21815 0.42 +1.0
4,558,353 + BWI76_RS21815 0.43 -0.9
4,558,361 - BWI76_RS21815 0.47 +0.7
4,558,376 + BWI76_RS21815 0.54 +0.0
4,558,376 + BWI76_RS21815 0.54 -0.3
4,558,384 - BWI76_RS21815 0.58 -0.9
4,558,384 - BWI76_RS21815 0.58 -0.0
4,558,469 - -0.7
4,558,501 - -0.0
4,558,661 + -0.2
4,558,664 - +0.3
4,558,669 - -0.9
4,558,680 - -0.4
4,558,696 + +0.1
4,558,722 - +0.1
4,558,732 - +1.4
4,558,742 - -0.5
4,558,767 + +0.3
4,558,767 + +0.0
4,558,767 + +0.4
4,558,767 + +0.7
4,558,775 - -0.6
4,558,775 - -0.0
4,558,777 + -0.2
4,558,777 + -0.1
4,558,780 - -1.1
4,558,782 + -0.7
4,558,782 + +0.2
4,558,782 + +0.5
4,558,782 + +1.0
4,558,782 + -0.3
4,558,782 + +1.1
4,558,782 + +2.6
4,558,782 + +0.8
4,558,782 + +0.1
4,558,782 + +1.0
4,558,782 + +0.7
4,558,787 + +0.4
4,558,787 + +0.2
4,558,787 + +0.2
4,558,789 - +0.2
4,558,790 - +0.1
4,558,790 - +3.3
4,558,790 - +0.5
4,558,790 - -2.7
4,558,790 - +0.6
4,558,790 - +2.2
4,558,790 - -0.2
4,558,790 - -1.1
4,558,790 - +0.7
4,558,790 - -1.7
4,558,790 - +0.2
4,558,790 - +2.2
4,558,795 - +1.2
4,558,795 - -0.1
4,558,795 - -0.7
4,558,797 + +1.0
4,558,797 + +2.0
4,558,805 - +0.1
4,558,808 + +0.8
4,558,816 - +0.6
4,558,816 - -0.5
4,558,816 - +0.4
4,558,816 - -0.0
4,558,828 - -0.6
4,558,837 - -0.2
4,558,842 + +0.3
4,558,856 - +0.8
4,558,856 - +0.3
4,558,886 - BWI76_RS21820 0.13 -0.4
4,558,886 - BWI76_RS21820 0.13 +0.5
4,558,886 - BWI76_RS21820 0.13 +1.0
4,558,886 - BWI76_RS21820 0.13 -0.2
4,558,886 - -0.0
4,558,886 - BWI76_RS21820 0.13 +0.3
4,558,886 - BWI76_RS21820 0.13 -0.5
4,558,914 - BWI76_RS21820 0.24 -0.7
4,558,920 - BWI76_RS21820 0.26 -0.5
4,558,947 - BWI76_RS21820 0.36 +0.4
4,558,947 - BWI76_RS21820 0.36 +1.7
4,558,977 - BWI76_RS21820 0.48 -1.2
4,559,029 - BWI76_RS21820 0.67 -0.7
4,559,035 - BWI76_RS21820 0.69 -0.8
4,559,039 - BWI76_RS21820 0.71 +0.3

Or see this region's nucleotide sequence