Experiment: 2'-Deoxycytidine 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15520 and BWI76_RS15525 are separated by 86 nucleotides BWI76_RS15525 and BWI76_RS15530 overlap by 14 nucleotides BWI76_RS15530 and BWI76_RS15535 overlap by 4 nucleotides BWI76_RS15535 and BWI76_RS15540 overlap by 1 nucleotides
BWI76_RS15520: BWI76_RS15520 - hypothetical protein, at 3,250,770 to 3,252,617
_RS15520
BWI76_RS15525: BWI76_RS15525 - hypothetical protein, at 3,252,704 to 3,255,181
_RS15525
BWI76_RS15530: BWI76_RS15530 - hypothetical protein, at 3,255,168 to 3,255,563
_RS15530
BWI76_RS15535: BWI76_RS15535 - hypothetical protein, at 3,255,560 to 3,256,030
_RS15535
BWI76_RS15540: BWI76_RS15540 - hypothetical protein, at 3,256,030 to 3,256,506
_RS15540
Position (kb)
3252
3253
3254
3255
3256 Strain fitness (log2 ratio)
-1
0
1
2
3 at 3251.712 kb on - strand, within BWI76_RS15520 at 3251.737 kb on + strand, within BWI76_RS15520 at 3251.745 kb on - strand, within BWI76_RS15520 at 3251.770 kb on - strand, within BWI76_RS15520 at 3251.770 kb on - strand, within BWI76_RS15520 at 3251.864 kb on + strand, within BWI76_RS15520 at 3251.893 kb on - strand, within BWI76_RS15520 at 3251.893 kb on - strand, within BWI76_RS15520 at 3251.916 kb on + strand, within BWI76_RS15520 at 3251.919 kb on + strand, within BWI76_RS15520 at 3251.919 kb on - strand, within BWI76_RS15520 at 3251.927 kb on - strand, within BWI76_RS15520 at 3251.929 kb on + strand, within BWI76_RS15520 at 3251.937 kb on - strand, within BWI76_RS15520 at 3251.961 kb on + strand, within BWI76_RS15520 at 3251.985 kb on - strand, within BWI76_RS15520 at 3252.020 kb on - strand, within BWI76_RS15520 at 3252.025 kb on - strand, within BWI76_RS15520 at 3252.030 kb on + strand, within BWI76_RS15520 at 3252.048 kb on - strand, within BWI76_RS15520 at 3252.314 kb on + strand, within BWI76_RS15520 at 3252.390 kb on - strand, within BWI76_RS15520 at 3252.436 kb on + strand at 3252.444 kb on - strand at 3252.452 kb on + strand at 3252.460 kb on - strand at 3252.469 kb on + strand at 3252.477 kb on - strand at 3252.517 kb on - strand at 3252.519 kb on - strand at 3252.523 kb on + strand at 3252.525 kb on - strand at 3252.543 kb on + strand at 3252.551 kb on - strand at 3252.683 kb on - strand at 3252.766 kb on + strand at 3252.774 kb on - strand at 3252.795 kb on - strand at 3252.805 kb on - strand at 3253.001 kb on + strand, within BWI76_RS15525 at 3253.051 kb on + strand, within BWI76_RS15525 at 3253.056 kb on + strand, within BWI76_RS15525 at 3253.069 kb on + strand, within BWI76_RS15525 at 3253.162 kb on + strand at 3253.170 kb on - strand, within BWI76_RS15525 at 3253.314 kb on + strand, within BWI76_RS15525 at 3253.334 kb on + strand, within BWI76_RS15525 at 3253.489 kb on - strand, within BWI76_RS15525 at 3253.520 kb on - strand, within BWI76_RS15525 at 3254.115 kb on + strand, within BWI76_RS15525 at 3254.120 kb on + strand, within BWI76_RS15525 at 3254.199 kb on - strand, within BWI76_RS15525 at 3254.204 kb on - strand, within BWI76_RS15525 at 3254.209 kb on - strand, within BWI76_RS15525 at 3254.622 kb on + strand, within BWI76_RS15525 at 3254.692 kb on + strand, within BWI76_RS15525 at 3254.700 kb on - strand, within BWI76_RS15525 at 3254.829 kb on + strand, within BWI76_RS15525 at 3255.017 kb on - strand at 3255.432 kb on + strand, within BWI76_RS15530 at 3255.517 kb on + strand at 3255.517 kb on + strand, within BWI76_RS15530 at 3255.525 kb on - strand at 3255.525 kb on - strand at 3255.555 kb on - strand at 3255.574 kb on + strand at 3255.574 kb on + strand at 3255.582 kb on - strand at 3255.582 kb on - strand at 3255.642 kb on - strand, within BWI76_RS15535 at 3255.854 kb on - strand, within BWI76_RS15535 at 3255.979 kb on + strand, within BWI76_RS15535 at 3255.987 kb on - strand at 3256.015 kb on + strand at 3256.131 kb on + strand, within BWI76_RS15540
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxycytidine 10 mM (C) remove 3,251,712 - BWI76_RS15520 0.51 +1.2 3,251,737 + BWI76_RS15520 0.52 +1.1 3,251,745 - BWI76_RS15520 0.53 +1.0 3,251,770 - BWI76_RS15520 0.54 +0.8 3,251,770 - BWI76_RS15520 0.54 +0.7 3,251,864 + BWI76_RS15520 0.59 +0.9 3,251,893 - BWI76_RS15520 0.61 +1.7 3,251,893 - BWI76_RS15520 0.61 +1.3 3,251,916 + BWI76_RS15520 0.62 +1.7 3,251,919 + BWI76_RS15520 0.62 +1.2 3,251,919 - BWI76_RS15520 0.62 +1.2 3,251,927 - BWI76_RS15520 0.63 +0.9 3,251,929 + BWI76_RS15520 0.63 +1.4 3,251,937 - BWI76_RS15520 0.63 +1.1 3,251,961 + BWI76_RS15520 0.64 +1.5 3,251,985 - BWI76_RS15520 0.66 +1.7 3,252,020 - BWI76_RS15520 0.68 +2.1 3,252,025 - BWI76_RS15520 0.68 +1.4 3,252,030 + BWI76_RS15520 0.68 +2.0 3,252,048 - BWI76_RS15520 0.69 +2.2 3,252,314 + BWI76_RS15520 0.84 +1.1 3,252,390 - BWI76_RS15520 0.88 -1.7 3,252,436 + +0.7 3,252,444 - +2.5 3,252,452 + +1.7 3,252,460 - +1.3 3,252,469 + +1.2 3,252,477 - +1.0 3,252,517 - +2.6 3,252,519 - +1.3 3,252,523 + +1.2 3,252,525 - +1.3 3,252,543 + +1.4 3,252,551 - +1.2 3,252,683 - +2.2 3,252,766 + +1.5 3,252,774 - +1.7 3,252,795 - +2.1 3,252,805 - +1.5 3,253,001 + BWI76_RS15525 0.12 +1.2 3,253,051 + BWI76_RS15525 0.14 +0.5 3,253,056 + BWI76_RS15525 0.14 +1.2 3,253,069 + BWI76_RS15525 0.15 +1.9 3,253,162 + +3.1 3,253,170 - BWI76_RS15525 0.19 +1.3 3,253,314 + BWI76_RS15525 0.25 +0.7 3,253,334 + BWI76_RS15525 0.25 +1.7 3,253,489 - BWI76_RS15525 0.32 +2.2 3,253,520 - BWI76_RS15525 0.33 +1.6 3,254,115 + BWI76_RS15525 0.57 +1.2 3,254,120 + BWI76_RS15525 0.57 +2.2 3,254,199 - BWI76_RS15525 0.60 +1.4 3,254,204 - BWI76_RS15525 0.61 +2.9 3,254,209 - BWI76_RS15525 0.61 +1.2 3,254,622 + BWI76_RS15525 0.77 +1.2 3,254,692 + BWI76_RS15525 0.80 +0.8 3,254,700 - BWI76_RS15525 0.81 +1.6 3,254,829 + BWI76_RS15525 0.86 +0.8 3,255,017 - +1.8 3,255,432 + BWI76_RS15530 0.67 +1.1 3,255,517 + -0.3 3,255,517 + BWI76_RS15530 0.88 +1.0 3,255,525 - +1.7 3,255,525 - +1.1 3,255,555 - +1.0 3,255,574 + +0.7 3,255,574 + +1.8 3,255,582 - +1.7 3,255,582 - +1.4 3,255,642 - BWI76_RS15535 0.17 +2.1 3,255,854 - BWI76_RS15535 0.62 +1.9 3,255,979 + BWI76_RS15535 0.89 +0.9 3,255,987 - +0.9 3,256,015 + +1.9 3,256,131 + BWI76_RS15540 0.21 +1.1
Or see this region's nucleotide sequence