Experiment: 2'-Deoxycytidine 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14825 and BWI76_RS14830 overlap by 1 nucleotides BWI76_RS14830 and BWI76_RS14835 are separated by 133 nucleotides BWI76_RS14835 and BWI76_RS14840 are separated by 180 nucleotides BWI76_RS14840 and BWI76_RS14845 are separated by 208 nucleotides
BWI76_RS14825: BWI76_RS14825 - dienelactone hydrolase family protein, at 3,106,733 to 3,107,332
_RS14825
BWI76_RS14830: BWI76_RS14830 - hypothetical protein, at 3,107,332 to 3,107,904
_RS14830
BWI76_RS14835: BWI76_RS14835 - hypothetical protein, at 3,108,038 to 3,108,430
_RS14835
BWI76_RS14840: BWI76_RS14840 - hypothetical protein, at 3,108,611 to 3,109,213
_RS14840
BWI76_RS14845: BWI76_RS14845 - hypothetical protein, at 3,109,422 to 3,110,048
_RS14845
Position (kb)
3108
3109 Strain fitness (log2 ratio)
-2
-1
0
1 at 3107.604 kb on - strand, within BWI76_RS14830 at 3107.727 kb on - strand, within BWI76_RS14830 at 3107.735 kb on + strand, within BWI76_RS14830 at 3107.821 kb on + strand, within BWI76_RS14830 at 3108.022 kb on + strand at 3108.130 kb on - strand, within BWI76_RS14835 at 3108.356 kb on + strand, within BWI76_RS14835 at 3108.425 kb on + strand at 3108.594 kb on - strand at 3108.726 kb on - strand, within BWI76_RS14840 at 3108.847 kb on - strand, within BWI76_RS14840 at 3109.135 kb on + strand, within BWI76_RS14840 at 3109.175 kb on - strand at 3109.240 kb on + strand at 3109.361 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxycytidine 10 mM (C) remove 3,107,604 - BWI76_RS14830 0.47 -0.1 3,107,727 - BWI76_RS14830 0.69 -0.3 3,107,735 + BWI76_RS14830 0.70 -0.1 3,107,821 + BWI76_RS14830 0.85 -0.6 3,108,022 + +0.0 3,108,130 - BWI76_RS14835 0.23 -1.9 3,108,356 + BWI76_RS14835 0.81 -0.1 3,108,425 + -0.1 3,108,594 - -0.2 3,108,726 - BWI76_RS14840 0.19 -0.3 3,108,847 - BWI76_RS14840 0.39 -0.7 3,109,135 + BWI76_RS14840 0.87 -0.3 3,109,175 - -0.1 3,109,240 + +0.4 3,109,361 - +0.3
Or see this region's nucleotide sequence