Experiment: 2'-Deoxycytidine 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09625 and BWI76_RS09630 are separated by 0 nucleotides BWI76_RS09630 and BWI76_RS09635 are separated by 38 nucleotides BWI76_RS09635 and BWI76_RS09640 are separated by 0 nucleotides
BWI76_RS09625: BWI76_RS09625 - hypothetical protein, at 2,014,078 to 2,014,429
_RS09625
BWI76_RS09630: BWI76_RS09630 - leucyl/phenylalanyl-tRNA--protein transferase, at 2,014,430 to 2,015,134
_RS09630
BWI76_RS09635: BWI76_RS09635 - amino acid ABC transporter ATP-binding protein, at 2,015,173 to 2,016,894
_RS09635
BWI76_RS09640: BWI76_RS09640 - cysteine/glutathione ABC transporter permease/ATP-binding protein CydD, at 2,016,895 to 2,018,661
_RS09640
Position (kb)
2015
2016
2017 Strain fitness (log2 ratio)
-2
-1
0
1 at 2014.300 kb on + strand, within BWI76_RS09625 at 2014.875 kb on - strand, within BWI76_RS09630 at 2014.886 kb on - strand, within BWI76_RS09630 at 2015.107 kb on + strand at 2015.184 kb on + strand at 2015.192 kb on - strand at 2015.306 kb on - strand at 2015.625 kb on - strand, within BWI76_RS09635 at 2016.197 kb on - strand, within BWI76_RS09635 at 2016.501 kb on + strand, within BWI76_RS09635 at 2016.577 kb on - strand, within BWI76_RS09635 at 2017.001 kb on - strand at 2017.007 kb on + strand at 2017.216 kb on - strand, within BWI76_RS09640 at 2017.319 kb on + strand, within BWI76_RS09640 at 2017.355 kb on - strand, within BWI76_RS09640 at 2017.392 kb on - strand, within BWI76_RS09640 at 2017.817 kb on - strand, within BWI76_RS09640
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxycytidine 10 mM (C) remove 2,014,300 + BWI76_RS09625 0.63 -0.3 2,014,875 - BWI76_RS09630 0.63 -0.1 2,014,886 - BWI76_RS09630 0.65 -0.4 2,015,107 + -0.5 2,015,184 + +0.3 2,015,192 - +1.0 2,015,306 - +0.2 2,015,625 - BWI76_RS09635 0.26 +0.9 2,016,197 - BWI76_RS09635 0.59 -1.2 2,016,501 + BWI76_RS09635 0.77 -1.1 2,016,577 - BWI76_RS09635 0.82 -1.4 2,017,001 - -2.1 2,017,007 + -1.8 2,017,216 - BWI76_RS09640 0.18 -1.8 2,017,319 + BWI76_RS09640 0.24 -2.1 2,017,355 - BWI76_RS09640 0.26 -1.7 2,017,392 - BWI76_RS09640 0.28 -1.8 2,017,817 - BWI76_RS09640 0.52 -1.7
Or see this region's nucleotide sequence