Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09050

Experiment: 2'-Deoxycytidine 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS09045 and BWI76_RS09050 are separated by 15 nucleotidesBWI76_RS09050 and BWI76_RS09055 are separated by 298 nucleotides BWI76_RS09045: BWI76_RS09045 - alpha-glucosidase, at 1,906,130 to 1,908,493 _RS09045 BWI76_RS09050: BWI76_RS09050 - MFS transporter, at 1,908,509 to 1,909,810 _RS09050 BWI76_RS09055: BWI76_RS09055 - LacI family transcriptional regulator, at 1,910,109 to 1,911,182 _RS09055 Position (kb) 1908 1909 1910Strain fitness (log2 ratio) -1 0 1 2at 1907.574 kb on + strand, within BWI76_RS09045at 1907.857 kb on - strand, within BWI76_RS09045at 1907.929 kb on + strand, within BWI76_RS09045at 1908.075 kb on - strand, within BWI76_RS09045at 1908.227 kb on + strand, within BWI76_RS09045at 1908.276 kb on - strandat 1908.424 kb on + strandat 1908.471 kb on - strandat 1908.550 kb on + strandat 1908.899 kb on + strand, within BWI76_RS09050at 1909.031 kb on + strand, within BWI76_RS09050at 1909.641 kb on + strand, within BWI76_RS09050at 1909.735 kb on + strandat 1910.023 kb on + strandat 1910.023 kb on + strandat 1910.091 kb on + strandat 1910.159 kb on + strandat 1910.223 kb on + strand, within BWI76_RS09055at 1910.231 kb on - strand, within BWI76_RS09055at 1910.397 kb on - strand, within BWI76_RS09055at 1910.418 kb on - strand, within BWI76_RS09055at 1910.463 kb on + strand, within BWI76_RS09055at 1910.725 kb on - strand, within BWI76_RS09055

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Per-strain Table

Position Strand Gene LocusTag Fraction 2'-Deoxycytidine 10 mM (C)
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1,907,574 + BWI76_RS09045 0.61 -0.3
1,907,857 - BWI76_RS09045 0.73 -0.4
1,907,929 + BWI76_RS09045 0.76 -0.3
1,908,075 - BWI76_RS09045 0.82 +2.4
1,908,227 + BWI76_RS09045 0.89 -1.1
1,908,276 - +0.6
1,908,424 + +0.1
1,908,471 - -0.4
1,908,550 + +0.0
1,908,899 + BWI76_RS09050 0.30 -1.1
1,909,031 + BWI76_RS09050 0.40 -0.7
1,909,641 + BWI76_RS09050 0.87 -0.8
1,909,735 + +0.3
1,910,023 + -0.2
1,910,023 + +0.3
1,910,091 + -0.7
1,910,159 + -0.2
1,910,223 + BWI76_RS09055 0.11 +0.0
1,910,231 - BWI76_RS09055 0.11 +0.2
1,910,397 - BWI76_RS09055 0.27 +2.5
1,910,418 - BWI76_RS09055 0.29 -0.6
1,910,463 + BWI76_RS09055 0.33 -0.2
1,910,725 - BWI76_RS09055 0.57 -0.3

Or see this region's nucleotide sequence