Experiment: 2'-Deoxycytidine 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS08695 and BWI76_RS08700 are separated by 186 nucleotides BWI76_RS08700 and BWI76_RS08705 are separated by 94 nucleotides BWI76_RS08705 and BWI76_RS08710 are separated by 58 nucleotides
BWI76_RS08695: BWI76_RS08695 - hypothetical protein, at 1,831,609 to 1,832,832
_RS08695
BWI76_RS08700: BWI76_RS08700 - helix-turn-helix-type transcriptional regulator, at 1,833,019 to 1,833,750
_RS08700
BWI76_RS08705: BWI76_RS08705 - putative LuxR family regulatory protein, at 1,833,845 to 1,834,399
_RS08705
BWI76_RS08710: BWI76_RS08710 - hypothetical protein, at 1,834,458 to 1,834,676
_RS08710
Position (kb)
1833
1834 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1832.078 kb on - strand, within BWI76_RS08695 at 1832.082 kb on + strand, within BWI76_RS08695 at 1832.090 kb on - strand, within BWI76_RS08695 at 1832.090 kb on - strand, within BWI76_RS08695 at 1832.090 kb on - strand, within BWI76_RS08695 at 1832.181 kb on + strand, within BWI76_RS08695 at 1832.184 kb on - strand, within BWI76_RS08695 at 1832.276 kb on - strand, within BWI76_RS08695 at 1832.293 kb on + strand, within BWI76_RS08695 at 1832.302 kb on - strand, within BWI76_RS08695 at 1832.304 kb on + strand, within BWI76_RS08695 at 1832.313 kb on - strand, within BWI76_RS08695 at 1832.317 kb on + strand, within BWI76_RS08695 at 1832.317 kb on - strand, within BWI76_RS08695 at 1832.329 kb on - strand, within BWI76_RS08695 at 1832.484 kb on + strand, within BWI76_RS08695 at 1832.484 kb on + strand, within BWI76_RS08695 at 1832.492 kb on - strand, within BWI76_RS08695 at 1832.553 kb on + strand, within BWI76_RS08695 at 1832.616 kb on - strand, within BWI76_RS08695 at 1832.618 kb on + strand, within BWI76_RS08695 at 1832.618 kb on + strand, within BWI76_RS08695 at 1832.618 kb on + strand, within BWI76_RS08695 at 1832.618 kb on + strand, within BWI76_RS08695 at 1832.618 kb on + strand, within BWI76_RS08695 at 1832.618 kb on + strand, within BWI76_RS08695 at 1832.618 kb on + strand, within BWI76_RS08695 at 1832.618 kb on + strand, within BWI76_RS08695 at 1832.618 kb on + strand, within BWI76_RS08695 at 1832.623 kb on + strand, within BWI76_RS08695 at 1832.623 kb on + strand, within BWI76_RS08695 at 1832.626 kb on - strand, within BWI76_RS08695 at 1832.626 kb on - strand, within BWI76_RS08695 at 1832.626 kb on - strand, within BWI76_RS08695 at 1832.626 kb on - strand, within BWI76_RS08695 at 1832.626 kb on - strand, within BWI76_RS08695 at 1832.626 kb on - strand, within BWI76_RS08695 at 1832.626 kb on - strand, within BWI76_RS08695 at 1832.626 kb on - strand, within BWI76_RS08695 at 1832.626 kb on - strand, within BWI76_RS08695 at 1832.626 kb on - strand, within BWI76_RS08695 at 1832.626 kb on - strand, within BWI76_RS08695 at 1832.644 kb on + strand, within BWI76_RS08695 at 1832.662 kb on - strand, within BWI76_RS08695 at 1832.678 kb on + strand, within BWI76_RS08695 at 1832.690 kb on + strand, within BWI76_RS08695 at 1832.690 kb on + strand, within BWI76_RS08695 at 1832.690 kb on + strand, within BWI76_RS08695 at 1832.690 kb on + strand, within BWI76_RS08695 at 1832.698 kb on - strand, within BWI76_RS08695 at 1832.698 kb on - strand, within BWI76_RS08695 at 1832.698 kb on - strand, within BWI76_RS08695 at 1832.698 kb on - strand, within BWI76_RS08695 at 1832.698 kb on - strand, within BWI76_RS08695 at 1832.707 kb on + strand, within BWI76_RS08695 at 1832.712 kb on + strand at 1832.716 kb on + strand at 1832.750 kb on - strand at 1832.765 kb on + strand at 1832.793 kb on + strand at 1832.801 kb on - strand at 1832.801 kb on - strand at 1832.805 kb on + strand at 1832.813 kb on - strand at 1832.858 kb on - strand at 1832.908 kb on + strand at 1832.908 kb on + strand at 1832.908 kb on + strand at 1832.917 kb on + strand at 1832.967 kb on + strand at 1833.004 kb on + strand at 1833.060 kb on + strand at 1833.093 kb on + strand, within BWI76_RS08700 at 1833.093 kb on + strand, within BWI76_RS08700 at 1833.095 kb on + strand, within BWI76_RS08700 at 1833.095 kb on + strand, within BWI76_RS08700 at 1833.095 kb on + strand, within BWI76_RS08700 at 1833.103 kb on - strand, within BWI76_RS08700 at 1833.114 kb on + strand, within BWI76_RS08700 at 1833.114 kb on + strand, within BWI76_RS08700 at 1833.127 kb on - strand, within BWI76_RS08700 at 1833.151 kb on + strand, within BWI76_RS08700 at 1833.191 kb on + strand, within BWI76_RS08700 at 1833.213 kb on + strand, within BWI76_RS08700 at 1833.341 kb on + strand, within BWI76_RS08700 at 1833.399 kb on + strand, within BWI76_RS08700 at 1833.399 kb on + strand, within BWI76_RS08700 at 1833.399 kb on + strand, within BWI76_RS08700 at 1833.422 kb on - strand, within BWI76_RS08700 at 1833.427 kb on - strand, within BWI76_RS08700 at 1833.430 kb on - strand, within BWI76_RS08700 at 1833.434 kb on + strand, within BWI76_RS08700 at 1833.582 kb on + strand, within BWI76_RS08700 at 1833.715 kb on + strand at 1833.716 kb on + strand at 1833.720 kb on + strand at 1833.728 kb on - strand at 1833.745 kb on + strand at 1833.745 kb on + strand at 1833.745 kb on + strand at 1833.745 kb on + strand at 1833.745 kb on + strand at 1833.745 kb on + strand at 1833.745 kb on + strand at 1833.745 kb on + strand at 1833.745 kb on + strand at 1833.745 kb on + strand at 1833.745 kb on + strand at 1833.753 kb on - strand at 1833.753 kb on - strand at 1833.753 kb on - strand at 1833.753 kb on - strand at 1833.753 kb on - strand at 1833.753 kb on - strand at 1833.755 kb on + strand at 1833.768 kb on - strand at 1833.814 kb on - strand at 1833.824 kb on + strand at 1833.826 kb on - strand at 1833.832 kb on - strand at 1833.832 kb on - strand at 1833.867 kb on - strand at 1833.868 kb on - strand at 1834.093 kb on + strand, within BWI76_RS08705 at 1834.093 kb on + strand, within BWI76_RS08705 at 1834.093 kb on + strand, within BWI76_RS08705 at 1834.098 kb on + strand, within BWI76_RS08705 at 1834.175 kb on + strand, within BWI76_RS08705 at 1834.209 kb on - strand, within BWI76_RS08705 at 1834.223 kb on - strand, within BWI76_RS08705 at 1834.223 kb on - strand, within BWI76_RS08705 at 1834.253 kb on - strand, within BWI76_RS08705 at 1834.319 kb on + strand, within BWI76_RS08705 at 1834.327 kb on - strand, within BWI76_RS08705 at 1834.405 kb on - strand at 1834.407 kb on - strand at 1834.468 kb on + strand at 1834.558 kb on - strand, within BWI76_RS08710 at 1834.570 kb on + strand at 1834.572 kb on + strand, within BWI76_RS08710 at 1834.579 kb on + strand, within BWI76_RS08710 at 1834.579 kb on + strand, within BWI76_RS08710 at 1834.579 kb on + strand, within BWI76_RS08710 at 1834.579 kb on + strand, within BWI76_RS08710 at 1834.579 kb on + strand, within BWI76_RS08710 at 1834.579 kb on + strand, within BWI76_RS08710 at 1834.579 kb on + strand, within BWI76_RS08710 at 1834.579 kb on + strand, within BWI76_RS08710 at 1834.579 kb on + strand, within BWI76_RS08710 at 1834.579 kb on + strand, within BWI76_RS08710 at 1834.580 kb on - strand, within BWI76_RS08710 at 1834.585 kb on - strand, within BWI76_RS08710 at 1834.587 kb on - strand, within BWI76_RS08710 at 1834.587 kb on - strand, within BWI76_RS08710 at 1834.587 kb on - strand, within BWI76_RS08710 at 1834.587 kb on - strand, within BWI76_RS08710 at 1834.587 kb on - strand, within BWI76_RS08710 at 1834.587 kb on - strand, within BWI76_RS08710 at 1834.587 kb on - strand, within BWI76_RS08710 at 1834.587 kb on - strand, within BWI76_RS08710 at 1834.587 kb on - strand, within BWI76_RS08710 at 1834.587 kb on - strand, within BWI76_RS08710 at 1834.587 kb on - strand, within BWI76_RS08710 at 1834.587 kb on - strand, within BWI76_RS08710 at 1834.591 kb on + strand, within BWI76_RS08710 at 1834.591 kb on + strand, within BWI76_RS08710 at 1834.591 kb on + strand, within BWI76_RS08710 at 1834.593 kb on - strand, within BWI76_RS08710 at 1834.597 kb on - strand, within BWI76_RS08710 at 1834.597 kb on - strand, within BWI76_RS08710 at 1834.599 kb on - strand, within BWI76_RS08710 at 1834.599 kb on - strand, within BWI76_RS08710 at 1834.599 kb on - strand, within BWI76_RS08710 at 1834.604 kb on - strand, within BWI76_RS08710 at 1834.678 kb on + strand at 1834.729 kb on + strand at 1834.729 kb on + strand at 1834.729 kb on + strand at 1834.729 kb on + strand at 1834.729 kb on + strand at 1834.729 kb on + strand at 1834.729 kb on + strand at 1834.729 kb on + strand at 1834.729 kb on + strand at 1834.729 kb on + strand at 1834.737 kb on - strand at 1834.737 kb on - strand at 1834.737 kb on - strand at 1834.737 kb on - strand at 1834.737 kb on - strand at 1834.737 kb on - strand at 1834.737 kb on - strand at 1834.742 kb on + strand at 1834.749 kb on + strand at 1834.749 kb on + strand at 1834.749 kb on + strand at 1834.749 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxycytidine 10 mM (C) remove 1,832,078 - BWI76_RS08695 0.38 -0.2 1,832,082 + BWI76_RS08695 0.39 -0.8 1,832,090 - BWI76_RS08695 0.39 +0.7 1,832,090 - BWI76_RS08695 0.39 -0.3 1,832,090 - BWI76_RS08695 0.39 -3.1 1,832,181 + BWI76_RS08695 0.47 +1.2 1,832,184 - BWI76_RS08695 0.47 +0.2 1,832,276 - BWI76_RS08695 0.54 +0.6 1,832,293 + BWI76_RS08695 0.56 -0.8 1,832,302 - BWI76_RS08695 0.57 +0.2 1,832,304 + BWI76_RS08695 0.57 -0.5 1,832,313 - BWI76_RS08695 0.58 -0.8 1,832,317 + BWI76_RS08695 0.58 -1.1 1,832,317 - BWI76_RS08695 0.58 -0.5 1,832,329 - BWI76_RS08695 0.59 +0.9 1,832,484 + BWI76_RS08695 0.71 +0.4 1,832,484 + BWI76_RS08695 0.71 -1.5 1,832,492 - BWI76_RS08695 0.72 -0.2 1,832,553 + BWI76_RS08695 0.77 -0.8 1,832,616 - BWI76_RS08695 0.82 +1.9 1,832,618 + BWI76_RS08695 0.82 -0.5 1,832,618 + BWI76_RS08695 0.82 -1.3 1,832,618 + BWI76_RS08695 0.82 -1.0 1,832,618 + BWI76_RS08695 0.82 -2.3 1,832,618 + BWI76_RS08695 0.82 +0.9 1,832,618 + BWI76_RS08695 0.82 +0.6 1,832,618 + BWI76_RS08695 0.82 +0.4 1,832,618 + BWI76_RS08695 0.82 +0.5 1,832,618 + BWI76_RS08695 0.82 -0.3 1,832,623 + BWI76_RS08695 0.83 -0.3 1,832,623 + BWI76_RS08695 0.83 -2.2 1,832,626 - BWI76_RS08695 0.83 +0.9 1,832,626 - BWI76_RS08695 0.83 -1.3 1,832,626 - BWI76_RS08695 0.83 -2.5 1,832,626 - BWI76_RS08695 0.83 +0.5 1,832,626 - BWI76_RS08695 0.83 -0.7 1,832,626 - BWI76_RS08695 0.83 -0.1 1,832,626 - BWI76_RS08695 0.83 +0.9 1,832,626 - BWI76_RS08695 0.83 -1.6 1,832,626 - BWI76_RS08695 0.83 -0.4 1,832,626 - BWI76_RS08695 0.83 +0.1 1,832,626 - BWI76_RS08695 0.83 -0.1 1,832,644 + BWI76_RS08695 0.85 -0.9 1,832,662 - BWI76_RS08695 0.86 -0.8 1,832,678 + BWI76_RS08695 0.87 -0.2 1,832,690 + BWI76_RS08695 0.88 -0.4 1,832,690 + BWI76_RS08695 0.88 -0.6 1,832,690 + BWI76_RS08695 0.88 +0.4 1,832,690 + BWI76_RS08695 0.88 -0.5 1,832,698 - BWI76_RS08695 0.89 +0.1 1,832,698 - BWI76_RS08695 0.89 +2.5 1,832,698 - BWI76_RS08695 0.89 -0.2 1,832,698 - BWI76_RS08695 0.89 +0.6 1,832,698 - BWI76_RS08695 0.89 -0.3 1,832,707 + BWI76_RS08695 0.90 +0.3 1,832,712 + -0.2 1,832,716 + +0.3 1,832,750 - -0.0 1,832,765 + +0.4 1,832,793 + -1.8 1,832,801 - +0.7 1,832,801 - +0.9 1,832,805 + -0.4 1,832,813 - -0.1 1,832,858 - -1.4 1,832,908 + +0.2 1,832,908 + +0.1 1,832,908 + -3.1 1,832,917 + +1.0 1,832,967 + +0.5 1,833,004 + +0.5 1,833,060 + +0.1 1,833,093 + BWI76_RS08700 0.10 -1.3 1,833,093 + BWI76_RS08700 0.10 -2.2 1,833,095 + BWI76_RS08700 0.10 -1.9 1,833,095 + BWI76_RS08700 0.10 -2.8 1,833,095 + BWI76_RS08700 0.10 -0.4 1,833,103 - BWI76_RS08700 0.11 -1.9 1,833,114 + BWI76_RS08700 0.13 +0.1 1,833,114 + BWI76_RS08700 0.13 -0.4 1,833,127 - BWI76_RS08700 0.15 -0.0 1,833,151 + BWI76_RS08700 0.18 -2.2 1,833,191 + BWI76_RS08700 0.23 -0.4 1,833,213 + BWI76_RS08700 0.27 -0.2 1,833,341 + BWI76_RS08700 0.44 +0.1 1,833,399 + BWI76_RS08700 0.52 -1.9 1,833,399 + BWI76_RS08700 0.52 -1.0 1,833,399 + BWI76_RS08700 0.52 -0.8 1,833,422 - BWI76_RS08700 0.55 +0.1 1,833,427 - BWI76_RS08700 0.56 -1.2 1,833,430 - BWI76_RS08700 0.56 -1.2 1,833,434 + BWI76_RS08700 0.57 -2.0 1,833,582 + BWI76_RS08700 0.77 -0.9 1,833,715 + -0.3 1,833,716 + -0.9 1,833,720 + -1.8 1,833,728 - +0.4 1,833,745 + +0.0 1,833,745 + +0.1 1,833,745 + -0.3 1,833,745 + -0.1 1,833,745 + -0.1 1,833,745 + +0.0 1,833,745 + -0.5 1,833,745 + +1.6 1,833,745 + -0.8 1,833,745 + +0.6 1,833,745 + -1.9 1,833,753 - +1.5 1,833,753 - +0.4 1,833,753 - -0.9 1,833,753 - -0.2 1,833,753 - +0.1 1,833,753 - +0.1 1,833,755 + -0.9 1,833,768 - -0.6 1,833,814 - +0.1 1,833,824 + -1.2 1,833,826 - +0.7 1,833,832 - +0.3 1,833,832 - -0.4 1,833,867 - +0.4 1,833,868 - +0.2 1,834,093 + BWI76_RS08705 0.45 -0.8 1,834,093 + BWI76_RS08705 0.45 -2.4 1,834,093 + BWI76_RS08705 0.45 -0.5 1,834,098 + BWI76_RS08705 0.46 -1.4 1,834,175 + BWI76_RS08705 0.59 -0.5 1,834,209 - BWI76_RS08705 0.66 -1.4 1,834,223 - BWI76_RS08705 0.68 +0.2 1,834,223 - BWI76_RS08705 0.68 -0.6 1,834,253 - BWI76_RS08705 0.74 -1.5 1,834,319 + BWI76_RS08705 0.85 +0.6 1,834,327 - BWI76_RS08705 0.87 -1.4 1,834,405 - -0.3 1,834,407 - -0.5 1,834,468 + +0.2 1,834,558 - BWI76_RS08710 0.46 -0.2 1,834,570 + -0.0 1,834,572 + BWI76_RS08710 0.52 -0.2 1,834,579 + BWI76_RS08710 0.55 -0.3 1,834,579 + BWI76_RS08710 0.55 +1.1 1,834,579 + BWI76_RS08710 0.55 -2.2 1,834,579 + BWI76_RS08710 0.55 +0.1 1,834,579 + BWI76_RS08710 0.55 +1.5 1,834,579 + BWI76_RS08710 0.55 +0.1 1,834,579 + BWI76_RS08710 0.55 -0.8 1,834,579 + BWI76_RS08710 0.55 +0.6 1,834,579 + BWI76_RS08710 0.55 +1.0 1,834,579 + BWI76_RS08710 0.55 -0.4 1,834,580 - BWI76_RS08710 0.56 -0.0 1,834,585 - BWI76_RS08710 0.58 +0.4 1,834,587 - BWI76_RS08710 0.59 -0.9 1,834,587 - BWI76_RS08710 0.59 +1.0 1,834,587 - BWI76_RS08710 0.59 -2.4 1,834,587 - BWI76_RS08710 0.59 -1.4 1,834,587 - BWI76_RS08710 0.59 -0.4 1,834,587 - BWI76_RS08710 0.59 -0.2 1,834,587 - BWI76_RS08710 0.59 -2.1 1,834,587 - BWI76_RS08710 0.59 +0.2 1,834,587 - BWI76_RS08710 0.59 -0.9 1,834,587 - BWI76_RS08710 0.59 -0.9 1,834,587 - BWI76_RS08710 0.59 -0.0 1,834,587 - BWI76_RS08710 0.59 -0.2 1,834,591 + BWI76_RS08710 0.61 -0.2 1,834,591 + BWI76_RS08710 0.61 -0.6 1,834,591 + BWI76_RS08710 0.61 +0.1 1,834,593 - BWI76_RS08710 0.62 -1.1 1,834,597 - BWI76_RS08710 0.63 -0.4 1,834,597 - BWI76_RS08710 0.63 -0.9 1,834,599 - BWI76_RS08710 0.64 +0.7 1,834,599 - BWI76_RS08710 0.64 +1.0 1,834,599 - BWI76_RS08710 0.64 -0.7 1,834,604 - BWI76_RS08710 0.67 -1.2 1,834,678 + +1.3 1,834,729 + +1.3 1,834,729 + -0.6 1,834,729 + -1.6 1,834,729 + -0.1 1,834,729 + +0.4 1,834,729 + +1.4 1,834,729 + +0.1 1,834,729 + -1.9 1,834,729 + -1.4 1,834,729 + +1.0 1,834,737 - +1.0 1,834,737 - -0.2 1,834,737 - -0.1 1,834,737 - +0.3 1,834,737 - +1.1 1,834,737 - +0.1 1,834,737 - -0.2 1,834,742 + -0.5 1,834,749 + +0.1 1,834,749 + +0.6 1,834,749 + +1.8 1,834,749 + -0.3
Or see this region's nucleotide sequence