Experiment: 2'-Deoxycytidine 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07110 and BWI76_RS07115 are separated by 221 nucleotides BWI76_RS07115 and BWI76_RS07120 are separated by 115 nucleotides BWI76_RS07120 and BWI76_RS07125 are separated by 333 nucleotides
BWI76_RS07110: BWI76_RS07110 - DNA-binding protein, at 1,493,434 to 1,493,891
_RS07110
BWI76_RS07115: BWI76_RS07115 - hypothetical protein, at 1,494,113 to 1,494,409
_RS07115
BWI76_RS07120: BWI76_RS07120 - LacI family transcriptional regulator, at 1,494,525 to 1,496,699
_RS07120
BWI76_RS07125: BWI76_RS07125 - hypothetical protein, at 1,497,033 to 1,497,857
_RS07125
Position (kb)
1494
1495
1496
1497 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1493.576 kb on - strand, within BWI76_RS07110 at 1493.659 kb on - strand, within BWI76_RS07110 at 1493.668 kb on - strand, within BWI76_RS07110 at 1493.669 kb on - strand, within BWI76_RS07110 at 1493.697 kb on + strand, within BWI76_RS07110 at 1493.697 kb on + strand, within BWI76_RS07110 at 1493.697 kb on + strand, within BWI76_RS07110 at 1493.697 kb on + strand, within BWI76_RS07110 at 1493.697 kb on + strand, within BWI76_RS07110 at 1493.697 kb on + strand, within BWI76_RS07110 at 1493.733 kb on + strand, within BWI76_RS07110 at 1493.761 kb on + strand, within BWI76_RS07110 at 1493.939 kb on - strand at 1493.985 kb on - strand at 1493.991 kb on - strand at 1494.078 kb on + strand at 1494.109 kb on + strand at 1494.132 kb on + strand at 1494.138 kb on - strand at 1494.154 kb on - strand, within BWI76_RS07115 at 1494.154 kb on - strand, within BWI76_RS07115 at 1494.169 kb on - strand, within BWI76_RS07115 at 1494.169 kb on - strand, within BWI76_RS07115 at 1494.249 kb on + strand, within BWI76_RS07115 at 1494.269 kb on - strand, within BWI76_RS07115 at 1494.292 kb on - strand, within BWI76_RS07115 at 1494.302 kb on + strand, within BWI76_RS07115 at 1494.314 kb on + strand, within BWI76_RS07115 at 1494.314 kb on + strand at 1494.319 kb on + strand, within BWI76_RS07115 at 1494.319 kb on + strand, within BWI76_RS07115 at 1494.319 kb on + strand, within BWI76_RS07115 at 1494.319 kb on + strand, within BWI76_RS07115 at 1494.319 kb on + strand, within BWI76_RS07115 at 1494.327 kb on - strand, within BWI76_RS07115 at 1494.327 kb on - strand at 1494.327 kb on - strand, within BWI76_RS07115 at 1494.333 kb on + strand, within BWI76_RS07115 at 1494.366 kb on + strand, within BWI76_RS07115 at 1494.377 kb on + strand, within BWI76_RS07115 at 1494.395 kb on - strand at 1494.434 kb on + strand at 1494.434 kb on + strand at 1494.442 kb on - strand at 1494.442 kb on - strand at 1494.457 kb on + strand at 1494.465 kb on - strand at 1494.484 kb on - strand at 1494.505 kb on - strand at 1494.558 kb on + strand at 1494.571 kb on + strand at 1494.579 kb on - strand at 1494.579 kb on - strand at 1494.644 kb on + strand at 1494.652 kb on + strand at 1494.652 kb on + strand at 1494.652 kb on + strand at 1494.652 kb on + strand at 1494.652 kb on + strand at 1494.652 kb on - strand at 1494.660 kb on - strand at 1494.660 kb on - strand at 1494.660 kb on - strand at 1494.660 kb on - strand at 1494.660 kb on - strand at 1494.660 kb on - strand at 1494.660 kb on - strand at 1494.660 kb on - strand at 1494.677 kb on + strand at 1494.677 kb on + strand at 1494.677 kb on + strand at 1494.677 kb on + strand at 1494.677 kb on + strand at 1494.685 kb on - strand at 1494.685 kb on - strand at 1494.688 kb on + strand at 1494.728 kb on + strand at 1494.729 kb on + strand at 1494.736 kb on - strand at 1494.740 kb on + strand at 1494.775 kb on + strand, within BWI76_RS07120 at 1494.780 kb on + strand, within BWI76_RS07120 at 1494.783 kb on - strand, within BWI76_RS07120 at 1494.783 kb on - strand, within BWI76_RS07120 at 1494.785 kb on + strand, within BWI76_RS07120 at 1495.016 kb on - strand, within BWI76_RS07120 at 1495.192 kb on - strand, within BWI76_RS07120 at 1495.201 kb on - strand, within BWI76_RS07120 at 1495.202 kb on - strand, within BWI76_RS07120 at 1495.202 kb on - strand, within BWI76_RS07120 at 1495.208 kb on - strand, within BWI76_RS07120 at 1495.426 kb on + strand, within BWI76_RS07120 at 1495.481 kb on - strand, within BWI76_RS07120 at 1495.491 kb on - strand, within BWI76_RS07120 at 1495.491 kb on - strand, within BWI76_RS07120 at 1495.625 kb on + strand, within BWI76_RS07120 at 1495.631 kb on + strand, within BWI76_RS07120 at 1495.726 kb on + strand, within BWI76_RS07120 at 1495.839 kb on - strand, within BWI76_RS07120 at 1495.872 kb on + strand, within BWI76_RS07120 at 1495.872 kb on + strand, within BWI76_RS07120 at 1495.920 kb on + strand at 1496.029 kb on + strand, within BWI76_RS07120 at 1496.029 kb on + strand, within BWI76_RS07120 at 1496.037 kb on - strand, within BWI76_RS07120 at 1496.073 kb on - strand, within BWI76_RS07120 at 1496.207 kb on - strand, within BWI76_RS07120 at 1496.562 kb on - strand at 1496.582 kb on - strand at 1496.604 kb on - strand at 1496.912 kb on + strand at 1497.011 kb on + strand at 1497.184 kb on - strand, within BWI76_RS07125 at 1497.231 kb on + strand, within BWI76_RS07125 at 1497.231 kb on + strand, within BWI76_RS07125 at 1497.246 kb on + strand, within BWI76_RS07125 at 1497.246 kb on + strand, within BWI76_RS07125 at 1497.255 kb on + strand, within BWI76_RS07125 at 1497.392 kb on + strand, within BWI76_RS07125 at 1497.404 kb on + strand, within BWI76_RS07125 at 1497.412 kb on - strand, within BWI76_RS07125 at 1497.431 kb on + strand, within BWI76_RS07125 at 1497.562 kb on + strand, within BWI76_RS07125 at 1497.662 kb on + strand, within BWI76_RS07125 at 1497.662 kb on + strand at 1497.670 kb on - strand, within BWI76_RS07125 at 1497.670 kb on - strand, within BWI76_RS07125 at 1497.670 kb on - strand, within BWI76_RS07125 at 1497.670 kb on - strand, within BWI76_RS07125 at 1497.690 kb on + strand, within BWI76_RS07125 at 1497.690 kb on + strand, within BWI76_RS07125 at 1497.690 kb on + strand, within BWI76_RS07125 at 1497.690 kb on + strand, within BWI76_RS07125 at 1497.698 kb on - strand, within BWI76_RS07125 at 1497.698 kb on - strand, within BWI76_RS07125 at 1497.698 kb on - strand, within BWI76_RS07125
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxycytidine 10 mM (C) remove 1,493,576 - BWI76_RS07110 0.31 +2.3 1,493,659 - BWI76_RS07110 0.49 +2.4 1,493,668 - BWI76_RS07110 0.51 -0.2 1,493,669 - BWI76_RS07110 0.51 +1.3 1,493,697 + BWI76_RS07110 0.57 -0.9 1,493,697 + BWI76_RS07110 0.57 +0.6 1,493,697 + BWI76_RS07110 0.57 -1.9 1,493,697 + BWI76_RS07110 0.57 +1.4 1,493,697 + BWI76_RS07110 0.57 +1.0 1,493,697 + BWI76_RS07110 0.57 -1.4 1,493,733 + BWI76_RS07110 0.65 +0.1 1,493,761 + BWI76_RS07110 0.71 -0.0 1,493,939 - -1.3 1,493,985 - -2.5 1,493,991 - +1.2 1,494,078 + -0.6 1,494,109 + -1.3 1,494,132 + +0.5 1,494,138 - +0.6 1,494,154 - BWI76_RS07115 0.14 -1.5 1,494,154 - BWI76_RS07115 0.14 +0.4 1,494,169 - BWI76_RS07115 0.19 +1.9 1,494,169 - BWI76_RS07115 0.19 -0.9 1,494,249 + BWI76_RS07115 0.46 +1.4 1,494,269 - BWI76_RS07115 0.53 +1.6 1,494,292 - BWI76_RS07115 0.60 -0.0 1,494,302 + BWI76_RS07115 0.64 +0.5 1,494,314 + BWI76_RS07115 0.68 +0.2 1,494,314 + +0.3 1,494,319 + BWI76_RS07115 0.69 -0.6 1,494,319 + BWI76_RS07115 0.69 +3.0 1,494,319 + BWI76_RS07115 0.69 +1.0 1,494,319 + BWI76_RS07115 0.69 +1.0 1,494,319 + BWI76_RS07115 0.69 +0.3 1,494,327 - BWI76_RS07115 0.72 -0.3 1,494,327 - -1.8 1,494,327 - BWI76_RS07115 0.72 +1.8 1,494,333 + BWI76_RS07115 0.74 -0.7 1,494,366 + BWI76_RS07115 0.85 -0.5 1,494,377 + BWI76_RS07115 0.89 -0.5 1,494,395 - -1.7 1,494,434 + -0.6 1,494,434 + -1.0 1,494,442 - +1.6 1,494,442 - +1.4 1,494,457 + -0.7 1,494,465 - -0.9 1,494,484 - +1.0 1,494,505 - +0.7 1,494,558 + +0.3 1,494,571 + +0.4 1,494,579 - -1.1 1,494,579 - -3.0 1,494,644 + -1.9 1,494,652 + -2.1 1,494,652 + -1.3 1,494,652 + +1.2 1,494,652 + -0.6 1,494,652 + -1.3 1,494,652 - -0.8 1,494,660 - -0.2 1,494,660 - -0.8 1,494,660 - -3.4 1,494,660 - -3.5 1,494,660 - -2.8 1,494,660 - +0.4 1,494,660 - -0.7 1,494,660 - +0.1 1,494,677 + -2.7 1,494,677 + -2.7 1,494,677 + -0.5 1,494,677 + -2.0 1,494,677 + -1.3 1,494,685 - +0.6 1,494,685 - -1.5 1,494,688 + -0.0 1,494,728 + -2.5 1,494,729 + -0.6 1,494,736 - -3.7 1,494,740 + -0.8 1,494,775 + BWI76_RS07120 0.11 -1.6 1,494,780 + BWI76_RS07120 0.12 +0.1 1,494,783 - BWI76_RS07120 0.12 -2.5 1,494,783 - BWI76_RS07120 0.12 -0.4 1,494,785 + BWI76_RS07120 0.12 -1.0 1,495,016 - BWI76_RS07120 0.23 -1.0 1,495,192 - BWI76_RS07120 0.31 -1.6 1,495,201 - BWI76_RS07120 0.31 -1.4 1,495,202 - BWI76_RS07120 0.31 -0.6 1,495,202 - BWI76_RS07120 0.31 -0.1 1,495,208 - BWI76_RS07120 0.31 -1.5 1,495,426 + BWI76_RS07120 0.41 -1.2 1,495,481 - BWI76_RS07120 0.44 -2.4 1,495,491 - BWI76_RS07120 0.44 +0.1 1,495,491 - BWI76_RS07120 0.44 -0.7 1,495,625 + BWI76_RS07120 0.51 -2.6 1,495,631 + BWI76_RS07120 0.51 -0.6 1,495,726 + BWI76_RS07120 0.55 -1.3 1,495,839 - BWI76_RS07120 0.60 +0.5 1,495,872 + BWI76_RS07120 0.62 -0.6 1,495,872 + BWI76_RS07120 0.62 -1.3 1,495,920 + -0.6 1,496,029 + BWI76_RS07120 0.69 -0.6 1,496,029 + BWI76_RS07120 0.69 -1.6 1,496,037 - BWI76_RS07120 0.70 -1.0 1,496,073 - BWI76_RS07120 0.71 -0.4 1,496,207 - BWI76_RS07120 0.77 -1.0 1,496,562 - -1.4 1,496,582 - -2.2 1,496,604 - -1.3 1,496,912 + -0.5 1,497,011 + +1.5 1,497,184 - BWI76_RS07125 0.18 -0.2 1,497,231 + BWI76_RS07125 0.24 +1.7 1,497,231 + BWI76_RS07125 0.24 -2.0 1,497,246 + BWI76_RS07125 0.26 +0.3 1,497,246 + BWI76_RS07125 0.26 +1.0 1,497,255 + BWI76_RS07125 0.27 -0.5 1,497,392 + BWI76_RS07125 0.44 +1.0 1,497,404 + BWI76_RS07125 0.45 -0.5 1,497,412 - BWI76_RS07125 0.46 +0.7 1,497,431 + BWI76_RS07125 0.48 +0.2 1,497,562 + BWI76_RS07125 0.64 -0.1 1,497,662 + BWI76_RS07125 0.76 -3.4 1,497,662 + +1.0 1,497,670 - BWI76_RS07125 0.77 -0.7 1,497,670 - BWI76_RS07125 0.77 -0.2 1,497,670 - BWI76_RS07125 0.77 +0.3 1,497,670 - BWI76_RS07125 0.77 -0.3 1,497,690 + BWI76_RS07125 0.80 -0.6 1,497,690 + BWI76_RS07125 0.80 -0.5 1,497,690 + BWI76_RS07125 0.80 +0.3 1,497,690 + BWI76_RS07125 0.80 -0.0 1,497,698 - BWI76_RS07125 0.81 -0.3 1,497,698 - BWI76_RS07125 0.81 +0.4 1,497,698 - BWI76_RS07125 0.81 -1.6
Or see this region's nucleotide sequence