Experiment: 2'-Deoxycytidine 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06465 and BWI76_RS06470 are separated by 45 nucleotides BWI76_RS06470 and BWI76_RS06475 are separated by 295 nucleotides BWI76_RS06475 and BWI76_RS06480 are separated by 11 nucleotides BWI76_RS06480 and BWI76_RS06485 overlap by 1 nucleotides BWI76_RS06485 and BWI76_RS06490 overlap by 11 nucleotides
BWI76_RS06465: BWI76_RS06465 - IclR family transcriptional regulator, at 1,359,105 to 1,359,863
_RS06465
BWI76_RS06470: BWI76_RS06470 - hypothetical protein, at 1,359,909 to 1,360,241
_RS06470
BWI76_RS06475: BWI76_RS06475 - protoheme IX farnesyltransferase, at 1,360,537 to 1,361,424
_RS06475
BWI76_RS06480: BWI76_RS06480 - cytochrome o ubiquinol oxidase subunit IV, at 1,361,436 to 1,361,765
_RS06480
BWI76_RS06485: BWI76_RS06485 - cytochrome o ubiquinol oxidase subunit III, at 1,361,765 to 1,362,376
_RS06485
BWI76_RS06490: BWI76_RS06490 - cytochrome ubiquinol oxidase subunit I, at 1,362,366 to 1,364,357
_RS06490
Position (kb)
1360
1361
1362 Strain fitness (log2 ratio)
-2
-1
0
1 at 1360.033 kb on - strand, within BWI76_RS06470 at 1360.147 kb on + strand, within BWI76_RS06470 at 1360.190 kb on + strand, within BWI76_RS06470 at 1360.277 kb on + strand at 1360.277 kb on + strand at 1360.277 kb on + strand at 1360.287 kb on - strand at 1360.287 kb on - strand at 1360.305 kb on - strand at 1360.305 kb on - strand at 1360.313 kb on - strand at 1360.546 kb on - strand at 1360.575 kb on + strand at 1360.842 kb on + strand, within BWI76_RS06475 at 1361.081 kb on - strand, within BWI76_RS06475 at 1361.591 kb on - strand, within BWI76_RS06480 at 1361.856 kb on - strand, within BWI76_RS06485 at 1361.946 kb on + strand, within BWI76_RS06485
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxycytidine 10 mM (C) remove 1,360,033 - BWI76_RS06470 0.37 -0.3 1,360,147 + BWI76_RS06470 0.71 -0.8 1,360,190 + BWI76_RS06470 0.84 -0.3 1,360,277 + +0.2 1,360,277 + +0.1 1,360,277 + -0.6 1,360,287 - -0.7 1,360,287 - -0.7 1,360,305 - -0.0 1,360,305 - -0.5 1,360,313 - -0.1 1,360,546 - -0.0 1,360,575 + -0.6 1,360,842 + BWI76_RS06475 0.34 -0.0 1,361,081 - BWI76_RS06475 0.61 -1.7 1,361,591 - BWI76_RS06480 0.47 -1.6 1,361,856 - BWI76_RS06485 0.15 -1.8 1,361,946 + BWI76_RS06485 0.30 -0.5
Or see this region's nucleotide sequence