Experiment: 2'-Deoxycytidine 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS05675 and BWI76_RS05680 are separated by 438 nucleotides BWI76_RS05680 and BWI76_RS05685 are separated by 251 nucleotides
BWI76_RS05675: BWI76_RS05675 - MFS transporter, at 1,192,196 to 1,193,593
_RS05675
BWI76_RS05680: BWI76_RS05680 - LacI family transcriptional regulator, at 1,194,032 to 1,195,063
_RS05680
BWI76_RS05685: BWI76_RS05685 - dihydrodipicolinate synthase family protein, at 1,195,315 to 1,196,244
_RS05685
Position (kb)
1194
1195
1196 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1193.074 kb on - strand, within BWI76_RS05675 at 1193.180 kb on - strand, within BWI76_RS05675 at 1193.254 kb on - strand, within BWI76_RS05675 at 1193.260 kb on + strand, within BWI76_RS05675 at 1193.336 kb on - strand, within BWI76_RS05675 at 1193.380 kb on + strand, within BWI76_RS05675 at 1193.587 kb on - strand at 1193.595 kb on + strand at 1193.605 kb on + strand at 1193.646 kb on + strand at 1193.669 kb on - strand at 1193.913 kb on - strand at 1194.009 kb on + strand at 1194.323 kb on - strand, within BWI76_RS05680 at 1194.407 kb on + strand, within BWI76_RS05680 at 1194.473 kb on + strand, within BWI76_RS05680 at 1194.530 kb on - strand, within BWI76_RS05680 at 1194.621 kb on - strand, within BWI76_RS05680 at 1195.023 kb on + strand at 1195.441 kb on + strand, within BWI76_RS05685 at 1195.681 kb on + strand, within BWI76_RS05685 at 1195.691 kb on + strand, within BWI76_RS05685 at 1195.740 kb on + strand, within BWI76_RS05685 at 1195.887 kb on - strand, within BWI76_RS05685 at 1195.920 kb on + strand, within BWI76_RS05685 at 1195.926 kb on - strand, within BWI76_RS05685 at 1195.939 kb on - strand, within BWI76_RS05685 at 1195.945 kb on - strand, within BWI76_RS05685 at 1196.021 kb on + strand, within BWI76_RS05685 at 1196.030 kb on - strand, within BWI76_RS05685
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxycytidine 10 mM (C) remove 1,193,074 - BWI76_RS05675 0.63 +0.4 1,193,180 - BWI76_RS05675 0.70 -0.1 1,193,254 - BWI76_RS05675 0.76 -1.4 1,193,260 + BWI76_RS05675 0.76 -0.6 1,193,336 - BWI76_RS05675 0.82 -0.3 1,193,380 + BWI76_RS05675 0.85 +1.3 1,193,587 - -1.4 1,193,595 + +2.6 1,193,605 + +0.0 1,193,646 + +0.2 1,193,669 - -0.0 1,193,913 - -0.3 1,194,009 + -0.4 1,194,323 - BWI76_RS05680 0.28 -1.3 1,194,407 + BWI76_RS05680 0.36 -2.2 1,194,473 + BWI76_RS05680 0.43 -1.4 1,194,530 - BWI76_RS05680 0.48 -0.9 1,194,621 - BWI76_RS05680 0.57 -1.7 1,195,023 + +0.1 1,195,441 + BWI76_RS05685 0.14 -1.6 1,195,681 + BWI76_RS05685 0.39 -1.0 1,195,691 + BWI76_RS05685 0.40 -0.5 1,195,740 + BWI76_RS05685 0.46 +1.3 1,195,887 - BWI76_RS05685 0.62 +1.4 1,195,920 + BWI76_RS05685 0.65 +1.6 1,195,926 - BWI76_RS05685 0.66 -0.6 1,195,939 - BWI76_RS05685 0.67 -0.9 1,195,945 - BWI76_RS05685 0.68 +0.6 1,196,021 + BWI76_RS05685 0.76 -0.2 1,196,030 - BWI76_RS05685 0.77 -0.6
Or see this region's nucleotide sequence