Experiment: 1,4-B-D-Galactobiose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0314 and BT0315 are separated by 205 nucleotides BT0315 and BT0316 are separated by 33 nucleotides
BT0314: BT0314 - ribosomal protein L11 methyltransferase (NCBI ptt file), at 377,857 to 378,699
BT0314
BT0315: BT0315 - hypothetical protein (NCBI ptt file), at 378,905 to 380,194
BT0315
BT0316: BT0316 - putative hemin receptor (NCBI ptt file), at 380,228 to 381,832
BT0316
Position (kb) 378
379
380
381 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 377.905 kb on + strand at 377.964 kb on - strand, within BT0314 at 378.048 kb on + strand, within BT0314 at 378.124 kb on + strand, within BT0314 at 378.124 kb on + strand, within BT0314 at 378.363 kb on - strand, within BT0314 at 378.485 kb on + strand, within BT0314 at 378.490 kb on - strand, within BT0314 at 378.569 kb on - strand, within BT0314 at 378.572 kb on + strand, within BT0314 at 378.573 kb on - strand, within BT0314 at 378.625 kb on + strand at 378.649 kb on + strand at 378.650 kb on - strand at 378.700 kb on - strand at 378.700 kb on - strand at 378.734 kb on + strand at 378.825 kb on + strand at 378.850 kb on + strand at 379.019 kb on + strand at 379.140 kb on + strand, within BT0315 at 379.142 kb on + strand, within BT0315 at 379.217 kb on + strand, within BT0315 at 379.301 kb on + strand, within BT0315 at 379.767 kb on + strand, within BT0315 at 379.767 kb on + strand, within BT0315 at 379.771 kb on + strand, within BT0315 at 379.802 kb on + strand, within BT0315 at 379.802 kb on + strand, within BT0315 at 379.825 kb on + strand, within BT0315 at 379.895 kb on + strand, within BT0315 at 379.952 kb on + strand, within BT0315 at 379.960 kb on + strand, within BT0315 at 379.960 kb on + strand, within BT0315 at 379.986 kb on - strand, within BT0315 at 379.999 kb on + strand, within BT0315 at 380.032 kb on + strand, within BT0315 at 380.056 kb on + strand, within BT0315 at 380.072 kb on + strand at 380.128 kb on + strand at 380.198 kb on + strand at 380.199 kb on - strand at 380.205 kb on + strand at 380.207 kb on + strand at 380.263 kb on + strand at 380.376 kb on + strand at 380.377 kb on - strand at 380.386 kb on + strand at 380.416 kb on + strand, within BT0316 at 380.435 kb on - strand, within BT0316 at 380.442 kb on + strand, within BT0316 at 380.442 kb on + strand, within BT0316 at 380.442 kb on + strand, within BT0316 at 380.486 kb on + strand, within BT0316 at 380.534 kb on - strand, within BT0316 at 380.537 kb on - strand, within BT0316 at 380.538 kb on + strand, within BT0316 at 380.606 kb on + strand, within BT0316 at 380.633 kb on + strand, within BT0316 at 380.633 kb on + strand, within BT0316 at 380.635 kb on + strand, within BT0316 at 380.656 kb on + strand, within BT0316 at 380.719 kb on + strand, within BT0316 at 380.829 kb on + strand, within BT0316 at 380.858 kb on + strand, within BT0316 at 380.862 kb on + strand, within BT0316 at 380.882 kb on + strand, within BT0316 at 380.932 kb on + strand, within BT0316 at 380.947 kb on + strand, within BT0316 at 380.949 kb on + strand, within BT0316 at 381.039 kb on - strand, within BT0316 at 381.040 kb on + strand, within BT0316 at 381.085 kb on + strand, within BT0316 at 381.085 kb on + strand, within BT0316 at 381.185 kb on - strand, within BT0316
Per-strain Table
Position Strand Gene LocusTag Fraction 1,4-B-D-Galactobiose (C) remove 377,905 + -1.1 377,964 - BT0314 0.13 -1.3 378,048 + BT0314 0.23 +1.1 378,124 + BT0314 0.32 -0.9 378,124 + BT0314 0.32 +0.5 378,363 - BT0314 0.60 -1.3 378,485 + BT0314 0.74 -0.8 378,490 - BT0314 0.75 -2.0 378,569 - BT0314 0.84 -1.8 378,572 + BT0314 0.85 -2.4 378,573 - BT0314 0.85 +1.1 378,625 + +0.5 378,649 + -0.9 378,650 - -1.0 378,700 - -3.3 378,700 - +1.1 378,734 + +0.5 378,825 + -1.8 378,850 + +2.1 379,019 + +2.8 379,140 + BT0315 0.18 +2.1 379,142 + BT0315 0.18 -0.4 379,217 + BT0315 0.24 +2.6 379,301 + BT0315 0.31 +1.1 379,767 + BT0315 0.67 +2.1 379,767 + BT0315 0.67 -4.2 379,771 + BT0315 0.67 +2.1 379,802 + BT0315 0.70 +0.1 379,802 + BT0315 0.70 -0.9 379,825 + BT0315 0.71 -1.9 379,895 + BT0315 0.77 +0.1 379,952 + BT0315 0.81 +0.4 379,960 + BT0315 0.82 +0.7 379,960 + BT0315 0.82 +0.1 379,986 - BT0315 0.84 +2.9 379,999 + BT0315 0.85 -0.5 380,032 + BT0315 0.87 -1.5 380,056 + BT0315 0.89 +1.1 380,072 + -0.5 380,128 + -2.4 380,198 + +0.1 380,199 - +2.9 380,205 + -1.8 380,207 + +0.5 380,263 + +2.0 380,376 + +3.5 380,377 - +0.5 380,386 + +0.5 380,416 + BT0316 0.12 +1.1 380,435 - BT0316 0.13 -0.5 380,442 + BT0316 0.13 +0.8 380,442 + BT0316 0.13 +2.1 380,442 + BT0316 0.13 -2.1 380,486 + BT0316 0.16 -0.9 380,534 - BT0316 0.19 +2.2 380,537 - BT0316 0.19 -0.9 380,538 + BT0316 0.19 +0.9 380,606 + BT0316 0.24 +2.5 380,633 + BT0316 0.25 +2.2 380,633 + BT0316 0.25 +1.8 380,635 + BT0316 0.25 +0.7 380,656 + BT0316 0.27 -0.5 380,719 + BT0316 0.31 +2.1 380,829 + BT0316 0.37 +1.2 380,858 + BT0316 0.39 -0.1 380,862 + BT0316 0.40 +2.1 380,882 + BT0316 0.41 +2.1 380,932 + BT0316 0.44 -1.5 380,947 + BT0316 0.45 +1.1 380,949 + BT0316 0.45 +2.0 381,039 - BT0316 0.51 +4.1 381,040 + BT0316 0.51 +0.5 381,085 + BT0316 0.53 +1.6 381,085 + BT0316 0.53 -2.4 381,185 - BT0316 0.60 +1.5
Or see this region's nucleotide sequence