Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3080

Experiment: KB with Huperzine A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Huperzine A 10 mM
3,683,140	+		Psyr_3078	0.69	+0.1
3,683,342	+		Psyr_3078	0.85	-0.8
3,683,343	-		Psyr_3078	0.85	+0.5
3,683,346	+		Psyr_3078	0.85	-0.8
3,683,406	+				+1.1
3,683,406	+				-0.5
3,683,406	+				+0.8
3,683,406	+				+0.5
3,683,407	-				-0.1
3,683,407	-				+0.4
3,683,407	-				+0.7
3,683,407	-				+1.3
3,683,407	-				+0.1
3,683,572	+				+1.0
3,683,572	+				+0.7
3,683,572	+				-0.4
3,683,572	+				+0.5
3,683,573	-				+0.3
3,683,573	-				-1.8
3,683,573	-				-0.6
3,684,085	+				+1.9
3,684,085	+				+0.2
3,684,085	+				-0.1
3,684,085	+				+1.6
3,684,086	-				+0.9
3,684,086	-				-0.8
3,684,086	-				+0.2
3,684,086	-				+1.1
3,684,101	-				+1.3
3,684,101	-				-0.9
3,684,123	+				+0.8
3,684,123	+				+0.2
3,684,124	-				+1.6
3,684,124	-				-0.4
3,684,149	-				-1.1
3,684,257	+				+0.3
3,684,518	-		Psyr_3080	0.16	+0.8
3,684,621	-		Psyr_3080	0.20	-0.9
3,684,805	+		Psyr_3080	0.27	+0.6
3,684,806	-		Psyr_3080	0.27	+0.4
3,684,874	+		Psyr_3080	0.30	+0.2
3,684,875	-		Psyr_3080	0.30	+0.6
3,685,133	-		Psyr_3080	0.40	+0.1
3,685,133	-		Psyr_3080	0.40	+0.6
3,685,148	-		Psyr_3080	0.41	+0.5
3,685,148	-		Psyr_3080	0.41	-0.6
3,685,225	+		Psyr_3080	0.44	+0.6
3,685,681	+		Psyr_3080	0.61	-1.4
3,685,681	+		Psyr_3080	0.61	-0.6
3,685,681	+		Psyr_3080	0.61	+0.2
3,685,681	+		Psyr_3080	0.61	+0.1
3,685,681	+		Psyr_3080	0.61	-0.3
3,685,682	-		Psyr_3080	0.61	+1.9
3,685,682	-		Psyr_3080	0.61	+0.2
3,685,682	-		Psyr_3080	0.61	+0.1
3,685,682	-		Psyr_3080	0.61	+0.1
3,685,682	-		Psyr_3080	0.61	+0.2
3,685,682	-		Psyr_3080	0.61	+1.8
3,685,682	-		Psyr_3080	0.61	-3.0
3,685,734	+		Psyr_3080	0.63	+0.9
3,685,735	-		Psyr_3080	0.63	-0.8
3,685,739	+		Psyr_3080	0.63	-0.4
3,685,862	-		Psyr_3080	0.68	+1.2
3,685,862	-		Psyr_3080	0.68	+1.4
3,686,131	+		Psyr_3080	0.79	+0.7
3,686,131	+		Psyr_3080	0.79	-0.2
3,686,131	+		Psyr_3080	0.79	-1.1
3,686,131	+		Psyr_3080	0.79	-0.6
3,686,131	+		Psyr_3080	0.79	+2.0
3,686,132	-		Psyr_3080	0.79	+1.1
3,686,132	-		Psyr_3080	0.79	-0.1
3,686,132	-		Psyr_3080	0.79	+0.2
3,686,132	-		Psyr_3080	0.79	-0.1
3,686,132	-		Psyr_3080	0.79	-0.1
3,686,133	+		Psyr_3080	0.79	+0.3
3,686,133	+		Psyr_3080	0.79	+0.8
3,686,133	+		Psyr_3080	0.79	+0.4
3,686,134	-		Psyr_3080	0.79	-1.1
3,686,134	-		Psyr_3080	0.79	+0.2
3,686,134	-		Psyr_3080	0.79	+0.4
3,686,472	-				-0.9
3,686,472	-				-0.7
3,686,672	+				+0.4
3,686,673	-				+0.5
3,686,673	-				+0.0
3,686,821	+				+1.2
3,687,423	+		Psyr_3081	0.66	+0.4
3,687,427	+		Psyr_3081	0.66	-0.7
3,687,427	+		Psyr_3081	0.66	+0.7
3,687,428	-		Psyr_3081	0.66	+0.5
3,687,428	-		Psyr_3081	0.66	+1.2