Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2768

Experiment: KB with Huperzine A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Huperzine A 10 mM
3,353,186	+		Psyr_2766	0.87	+0.4
3,353,278	+				-1.0
3,353,480	-		Psyr_2767	0.43	-0.0
3,353,546	+		Psyr_2767	0.55	+0.7
3,353,686	+		Psyr_2767	0.82	+0.4
3,353,687	-		Psyr_2767	0.82	+1.7
3,353,777	+				+1.4
3,353,778	-				-0.1
3,353,807	+				+1.7
3,353,808	-				-0.7
3,353,844	+				-0.8
3,353,844	+				-1.0
3,353,845	-				+0.3
3,353,845	-				+0.0
3,353,863	+				+1.5
3,353,863	+				-0.6
3,353,864	-				-1.6
3,353,874	+				+0.7
3,353,874	+				-0.7
3,353,875	-				-0.9
3,353,889	+				+1.0
3,353,889	+				+0.3
3,353,943	+				-0.3
3,353,943	+				-1.2
3,353,943	+				-0.8
3,353,948	-				+0.3
3,353,990	+				+1.3
3,353,990	+				+0.6
3,353,990	+				+0.5
3,353,991	-				-2.9
3,353,991	-				-0.3
3,353,991	-				-1.4
3,354,046	+				+0.1
3,354,315	+		Psyr_2768	0.64	-2.0
3,354,421	+				-0.5
3,354,422	-				-1.0
3,354,422	-				+0.1
3,354,447	+				-0.7
3,354,447	+				-0.8
3,354,447	+				+0.3
3,354,447	+				-0.0
3,354,447	+				-0.6
3,354,447	+				-0.8
3,354,448	-				-0.6
3,354,555	+		Psyr_2769	0.30	-0.5
3,354,555	+		Psyr_2769	0.30	-1.5
3,354,556	-		Psyr_2769	0.30	-1.1
3,354,556	-		Psyr_2769	0.30	-1.2
3,354,585	-		Psyr_2769	0.39	-1.5
3,354,610	+		Psyr_2769	0.47	-0.7
3,354,659	-		Psyr_2769	0.63	-1.3
3,354,691	+		Psyr_2769	0.73	-2.2
3,354,691	+		Psyr_2769	0.73	-2.5
3,354,728	+		Psyr_2769	0.85	+3.6
3,354,777	-				+0.9
3,354,798	+				-1.2
3,354,798	+				+0.3
3,354,798	+				-0.3
3,354,798	+				-1.4
3,354,799	-				+2.3
3,354,800	+				-0.5
3,354,800	+				-2.4
3,354,801	-				-0.6
3,354,801	-				-0.9
3,354,801	-				+0.6
3,354,870	+				-1.0
3,354,871	-				-0.0
3,354,896	+		Psyr_2770	0.11	-1.5
3,354,904	-		Psyr_2770	0.12	-1.0
3,354,904	-		Psyr_2770	0.12	-1.5
3,354,981	-		Psyr_2770	0.19	+0.0
3,355,096	+		Psyr_2770	0.29	-0.8
3,355,097	-		Psyr_2770	0.29	-0.0
3,355,160	+		Psyr_2770	0.35	-0.1
3,355,160	+		Psyr_2770	0.35	+0.3
3,355,161	-		Psyr_2770	0.35	-1.1
3,355,175	-		Psyr_2770	0.36	-0.9
3,355,297	-		Psyr_2770	0.47	-0.0
3,355,300	+		Psyr_2770	0.48	+0.8
3,355,301	-		Psyr_2770	0.48	-1.0
3,355,301	-		Psyr_2770	0.48	-0.2
3,355,324	-		Psyr_2770	0.50	-0.4
3,355,340	-		Psyr_2770	0.51	-1.0
3,355,395	+		Psyr_2770	0.56	-0.3