Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2513

Experiment: KB with Huperzine A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Huperzine A 10 mM
2,921,808	+		Psyr_2511	0.86	-0.1
2,921,809	-		Psyr_2511	0.86	+1.4
2,921,809	-		Psyr_2511	0.86	+0.6
2,921,921	+				+1.1
2,921,979	+				-0.2
2,921,979	+				+1.2
2,921,980	-				+0.2
2,922,012	+				+1.9
2,922,018	+				-0.8
2,922,018	+				+2.4
2,922,018	+				-0.3
2,922,018	+				-0.2
2,922,019	-				-0.9
2,922,019	-				+1.4
2,922,019	-				+0.4
2,922,019	-				+1.6
2,922,019	-				-0.5
2,922,019	-				+0.8
2,922,019	-				+0.8
2,922,019	-				+0.3
2,922,174	+		Psyr_2512	0.11	-0.5
2,922,174	+		Psyr_2512	0.11	-1.2
2,922,584	+				+0.9
2,922,643	+				+0.7
2,922,646	-				+0.3
2,922,661	-				+0.3
2,922,667	+				-2.0
2,922,670	+				+0.9
2,922,671	-				-1.3
2,922,673	+				+0.2
2,922,674	-				+0.4
2,922,674	-				-1.2
2,922,869	-				-0.0
2,922,872	+				-2.3
2,922,872	+				-1.6
2,922,872	+				-0.5
2,922,873	-				-0.2
2,922,887	+				-1.9
2,922,887	+				-0.3
2,922,887	+				+1.3
2,922,887	+				+0.9
2,922,887	+				-0.5
2,922,887	+				+1.0
2,922,887	+				-0.0
2,922,887	+				-2.0
2,922,887	+				-0.0
2,922,887	+				-2.2
2,922,888	-				+1.3
2,922,888	-				-1.5
2,922,888	-				-1.4
2,922,888	-				-1.5
2,922,889	+				-2.3
2,922,889	+				-1.7
2,922,889	+				-0.7
2,922,889	+				-1.8
2,922,889	+				+0.7
2,922,890	-				-0.1
2,922,890	-				+0.5
2,922,890	-				-0.5
2,922,890	-				-1.6
2,922,890	-				+0.0
2,922,890	-				+0.3
2,922,891	+				-2.8
2,922,891	+				-2.2
2,922,891	+				-1.6
2,922,892	-				+0.3
2,922,892	-				-0.3
2,922,945	-		Psyr_2513	0.13	-1.2
2,922,945	-		Psyr_2513	0.13	-1.0
2,923,166	+		Psyr_2513	0.34	-0.0
2,923,167	-		Psyr_2513	0.34	-0.1
2,923,302	+		Psyr_2513	0.46	+0.6
2,923,302	+		Psyr_2513	0.46	-1.1
2,923,303	-		Psyr_2513	0.47	+0.3
2,923,346	+		Psyr_2513	0.51	+0.1
2,923,346	+		Psyr_2513	0.51	-0.3
2,923,346	+		Psyr_2513	0.51	-0.0
2,923,347	-		Psyr_2513	0.51	-1.5
2,923,385	+		Psyr_2513	0.54	+0.7
2,923,424	+		Psyr_2513	0.58	-1.4
2,923,424	+		Psyr_2513	0.58	+0.7
2,923,451	+		Psyr_2513	0.60	-1.0
2,923,452	-		Psyr_2513	0.60	+1.0
2,923,562	+		Psyr_2513	0.71	-0.9
2,923,658	+		Psyr_2513	0.79	+0.9
2,923,659	-		Psyr_2513	0.80	+0.9
2,923,707	-		Psyr_2513	0.84	-1.6
2,923,707	-		Psyr_2513	0.84	-0.7
2,923,773	-				-0.1
2,923,985	+		Psyr_2514	0.14	+1.2
2,924,043	+		Psyr_2514	0.22	+0.3
2,924,043	+		Psyr_2514	0.22	+0.0
2,924,043	+		Psyr_2514	0.22	-1.0
2,924,044	-		Psyr_2514	0.22	-0.3
2,924,044	-		Psyr_2514	0.22	+1.9
2,924,044	-		Psyr_2514	0.22	+0.6
2,924,044	-		Psyr_2514	0.22	+0.2
2,924,314	-		Psyr_2514	0.60	+0.3
2,924,338	+		Psyr_2514	0.63	-0.0
2,924,414	+		Psyr_2514	0.74	-0.3
2,924,545	+				+0.9
2,924,576	+				-1.0
2,924,576	+				-0.1
2,924,577	-				+0.2
2,924,577	-				-0.4
2,924,577	-				-0.9
2,924,577	-				-0.2
2,924,601	+				-0.0
2,924,601	+				-0.3
2,924,601	+				+1.0
2,924,601	+				-0.7
2,924,601	+				+0.1
2,924,601	+				+0.8
2,924,602	-				-0.1
2,924,602	-				+0.6
2,924,602	-				+1.3
2,924,602	-				+1.7
2,924,602	-				+0.6
2,924,602	-				+1.5
2,924,602	-				-1.3