Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1946

Experiment: KB with Huperzine A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Huperzine A 10 mM
2,230,017	+				+0.4
2,230,018	-				+1.8
2,230,137	+				+0.5
2,230,138	-				+0.2
2,230,138	-				+0.2
2,230,138	-				+0.1
2,230,368	+				-2.2
2,230,369	-				-1.8
2,230,369	-				-1.1
2,230,640	+				-0.3
2,230,904	+				-0.6
2,230,904	+				-0.8
2,230,905	-				-0.5
2,231,015	+				+0.2
2,231,254	+		Psyr_1946	0.22	+0.0
2,231,255	-		Psyr_1946	0.22	-0.9
2,231,994	-		Psyr_1946	0.74	-1.2
2,232,010	+		Psyr_1946	0.75	-1.8
2,232,261	+				-0.5
2,232,262	-				+1.4
2,232,369	+				-0.5
2,232,369	+				-1.4
2,232,370	-				+0.3
2,232,375	+				-0.4
2,232,375	+				+0.8
2,232,391	-				-0.4
2,232,391	-				-1.9
2,232,391	-				+0.5
2,232,503	+		Psyr_1947	0.29	+0.1
2,232,504	-		Psyr_1947	0.29	+0.4
2,232,522	-		Psyr_1947	0.37	+0.2
2,232,522	-		Psyr_1947	0.37	+0.1
2,232,587	+		Psyr_1947	0.67	+1.2
2,232,801	-				-1.1
2,232,817	-				-0.6
2,232,983	-				-1.9
2,233,059	+				-0.6
2,233,060	-				-0.1