Experiment: KB with Huperzine A 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0654 and Psyr_0655 are separated by 69 nucleotides Psyr_0655 and Psyr_0656 are separated by 164 nucleotides Psyr_0656 and Psyr_0657 are separated by 138 nucleotides Psyr_0657 and Psyr_0658 are separated by 60 nucleotides
Psyr_0654: Psyr_0654 - Copper-translocating P-type ATPase:Heavy metal translocating P-type ATPase, at 741,617 to 743,815
_0654
Psyr_0655: Psyr_0655 - conserved domain protein, at 743,885 to 744,265
_0655
Psyr_0656: Psyr_0656 - Heavy metal transport/detoxification protein, at 744,430 to 744,627
_0656
Psyr_0657: Psyr_0657 - Drug resistance transporter Bcr/CflA subfamily, at 744,766 to 745,962
_0657
Psyr_0658: Psyr_0658 - Zinc-containing alcohol dehydrogenase superfamily, at 746,023 to 747,036
_0658
Position (kb) 744
745
746 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 743.839 kb on + strand at 743.889 kb on + strand at 743.889 kb on + strand at 743.890 kb on - strand at 743.890 kb on - strand at 743.890 kb on - strand at 743.890 kb on - strand at 743.913 kb on + strand at 743.913 kb on + strand at 743.913 kb on + strand at 743.913 kb on + strand at 743.913 kb on + strand at 743.913 kb on + strand at 743.913 kb on + strand at 743.913 kb on + strand at 743.913 kb on + strand at 743.914 kb on - strand at 743.914 kb on - strand at 743.914 kb on - strand at 743.943 kb on + strand, within Psyr_0655 at 743.943 kb on + strand, within Psyr_0655 at 743.944 kb on - strand, within Psyr_0655 at 743.954 kb on - strand, within Psyr_0655 at 744.093 kb on + strand, within Psyr_0655 at 744.094 kb on - strand, within Psyr_0655 at 744.094 kb on - strand, within Psyr_0655 at 744.123 kb on + strand, within Psyr_0655 at 744.123 kb on + strand, within Psyr_0655 at 744.123 kb on + strand, within Psyr_0655 at 744.123 kb on + strand, within Psyr_0655 at 744.123 kb on + strand, within Psyr_0655 at 744.124 kb on - strand, within Psyr_0655 at 744.124 kb on - strand, within Psyr_0655 at 744.124 kb on - strand, within Psyr_0655 at 744.124 kb on - strand, within Psyr_0655 at 744.124 kb on - strand, within Psyr_0655 at 744.124 kb on - strand, within Psyr_0655 at 744.124 kb on - strand, within Psyr_0655 at 744.217 kb on + strand, within Psyr_0655 at 744.273 kb on - strand at 744.273 kb on - strand at 744.283 kb on + strand at 744.283 kb on + strand at 744.283 kb on + strand at 744.283 kb on + strand at 744.283 kb on + strand at 744.283 kb on + strand at 744.284 kb on - strand at 744.284 kb on - strand at 744.284 kb on - strand at 744.284 kb on - strand at 744.301 kb on + strand at 744.301 kb on + strand at 744.301 kb on + strand at 744.301 kb on + strand at 744.301 kb on + strand at 744.301 kb on + strand at 744.301 kb on + strand at 744.301 kb on + strand at 744.301 kb on + strand at 744.301 kb on + strand at 744.301 kb on + strand at 744.301 kb on + strand at 744.301 kb on + strand at 744.302 kb on - strand at 744.302 kb on - strand at 744.302 kb on - strand at 744.302 kb on - strand at 744.302 kb on - strand at 744.302 kb on - strand at 744.302 kb on - strand at 744.302 kb on - strand at 744.302 kb on - strand at 744.302 kb on - strand at 744.438 kb on - strand at 744.438 kb on - strand at 744.666 kb on - strand at 744.687 kb on + strand at 744.687 kb on + strand at 744.688 kb on - strand at 744.688 kb on - strand at 744.732 kb on - strand at 744.773 kb on + strand at 744.773 kb on + strand at 744.774 kb on - strand at 744.832 kb on + strand at 744.832 kb on + strand at 744.832 kb on + strand at 744.832 kb on + strand at 744.832 kb on + strand at 744.832 kb on + strand at 744.832 kb on + strand at 744.833 kb on - strand at 744.833 kb on - strand at 744.833 kb on - strand at 744.833 kb on - strand at 744.833 kb on - strand at 744.862 kb on + strand at 744.887 kb on + strand, within Psyr_0657 at 744.887 kb on + strand, within Psyr_0657 at 744.887 kb on + strand, within Psyr_0657 at 744.887 kb on + strand, within Psyr_0657 at 744.887 kb on + strand, within Psyr_0657 at 744.887 kb on + strand, within Psyr_0657 at 744.888 kb on - strand, within Psyr_0657 at 744.888 kb on - strand, within Psyr_0657 at 744.888 kb on - strand, within Psyr_0657 at 744.888 kb on - strand, within Psyr_0657 at 744.888 kb on - strand, within Psyr_0657 at 744.888 kb on - strand, within Psyr_0657 at 744.888 kb on - strand, within Psyr_0657 at 744.888 kb on - strand, within Psyr_0657 at 744.941 kb on - strand, within Psyr_0657 at 744.941 kb on - strand, within Psyr_0657 at 745.224 kb on + strand, within Psyr_0657 at 745.225 kb on - strand, within Psyr_0657 at 745.225 kb on - strand, within Psyr_0657 at 745.438 kb on + strand, within Psyr_0657 at 745.438 kb on + strand, within Psyr_0657 at 745.439 kb on - strand, within Psyr_0657 at 745.439 kb on - strand, within Psyr_0657 at 745.439 kb on - strand, within Psyr_0657 at 745.439 kb on - strand, within Psyr_0657 at 745.474 kb on + strand, within Psyr_0657 at 745.474 kb on + strand, within Psyr_0657 at 745.474 kb on + strand, within Psyr_0657 at 745.475 kb on - strand, within Psyr_0657 at 745.475 kb on - strand, within Psyr_0657 at 745.495 kb on + strand, within Psyr_0657 at 745.496 kb on - strand, within Psyr_0657 at 745.557 kb on + strand, within Psyr_0657 at 745.558 kb on - strand, within Psyr_0657 at 745.558 kb on - strand, within Psyr_0657 at 745.609 kb on + strand, within Psyr_0657 at 746.039 kb on - strand at 746.225 kb on + strand, within Psyr_0658 at 746.225 kb on + strand, within Psyr_0658 at 746.225 kb on + strand, within Psyr_0658 at 746.225 kb on + strand, within Psyr_0658 at 746.225 kb on + strand, within Psyr_0658 at 746.225 kb on + strand, within Psyr_0658 at 746.226 kb on - strand, within Psyr_0658 at 746.226 kb on - strand, within Psyr_0658 at 746.226 kb on - strand, within Psyr_0658 at 746.226 kb on - strand, within Psyr_0658 at 746.226 kb on - strand, within Psyr_0658 at 746.226 kb on - strand, within Psyr_0658 at 746.226 kb on - strand, within Psyr_0658 at 746.771 kb on + strand, within Psyr_0658 at 746.771 kb on + strand, within Psyr_0658 at 746.771 kb on + strand, within Psyr_0658 at 746.771 kb on + strand, within Psyr_0658 at 746.772 kb on - strand, within Psyr_0658 at 746.772 kb on - strand, within Psyr_0658 at 746.772 kb on - strand, within Psyr_0658 at 746.772 kb on - strand, within Psyr_0658 at 746.772 kb on - strand, within Psyr_0658 at 746.912 kb on - strand, within Psyr_0658
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Huperzine A 10 mM remove 743,839 + +0.2 743,889 + -1.5 743,889 + -0.5 743,890 - -0.3 743,890 - -0.6 743,890 - +0.8 743,890 - +0.6 743,913 + +0.1 743,913 + +0.6 743,913 + -1.3 743,913 + -0.7 743,913 + +0.1 743,913 + +1.4 743,913 + +3.1 743,913 + -0.8 743,913 + -0.9 743,914 - -0.4 743,914 - +0.8 743,914 - +0.5 743,943 + Psyr_0655 0.15 -0.3 743,943 + Psyr_0655 0.15 -0.5 743,944 - Psyr_0655 0.15 +0.1 743,954 - Psyr_0655 0.18 -2.1 744,093 + Psyr_0655 0.55 +0.4 744,094 - Psyr_0655 0.55 -0.7 744,094 - Psyr_0655 0.55 -0.6 744,123 + Psyr_0655 0.62 -0.7 744,123 + Psyr_0655 0.62 +0.2 744,123 + Psyr_0655 0.62 -1.0 744,123 + Psyr_0655 0.62 -0.9 744,123 + Psyr_0655 0.62 -0.4 744,124 - Psyr_0655 0.63 +1.1 744,124 - Psyr_0655 0.63 +1.2 744,124 - Psyr_0655 0.63 +0.6 744,124 - Psyr_0655 0.63 +0.6 744,124 - Psyr_0655 0.63 -0.7 744,124 - Psyr_0655 0.63 -0.6 744,124 - Psyr_0655 0.63 +1.1 744,217 + Psyr_0655 0.87 -0.2 744,273 - +0.0 744,273 - +0.4 744,283 + -1.5 744,283 + +0.4 744,283 + -0.7 744,283 + +0.4 744,283 + +0.1 744,283 + +0.1 744,284 - +0.3 744,284 - +0.9 744,284 - -0.4 744,284 - +0.9 744,301 + -0.4 744,301 + -1.9 744,301 + -1.2 744,301 + -0.1 744,301 + -1.6 744,301 + -0.9 744,301 + -0.4 744,301 + +0.1 744,301 + +0.8 744,301 + -0.2 744,301 + +0.6 744,301 + +0.2 744,301 + +1.1 744,302 - -1.1 744,302 - -0.4 744,302 - -0.6 744,302 - -1.9 744,302 - +0.3 744,302 - -1.6 744,302 - +0.7 744,302 - +0.6 744,302 - -0.1 744,302 - +0.3 744,438 - +1.4 744,438 - +0.7 744,666 - -0.7 744,687 + -0.2 744,687 + +0.0 744,688 - +0.0 744,688 - +1.1 744,732 - +1.0 744,773 + +0.1 744,773 + -0.7 744,774 - -0.6 744,832 + +0.4 744,832 + +0.6 744,832 + -1.6 744,832 + -1.3 744,832 + +0.7 744,832 + +0.1 744,832 + +0.7 744,833 - +0.5 744,833 - -0.3 744,833 - -2.6 744,833 - +0.4 744,833 - +0.5 744,862 + +0.5 744,887 + Psyr_0657 0.10 +1.5 744,887 + Psyr_0657 0.10 +0.1 744,887 + Psyr_0657 0.10 +0.3 744,887 + Psyr_0657 0.10 +0.3 744,887 + Psyr_0657 0.10 +0.5 744,887 + Psyr_0657 0.10 +0.7 744,888 - Psyr_0657 0.10 +0.5 744,888 - Psyr_0657 0.10 +1.0 744,888 - Psyr_0657 0.10 +0.5 744,888 - Psyr_0657 0.10 +0.1 744,888 - Psyr_0657 0.10 -0.4 744,888 - Psyr_0657 0.10 -0.1 744,888 - Psyr_0657 0.10 +0.2 744,888 - Psyr_0657 0.10 -1.6 744,941 - Psyr_0657 0.15 -0.2 744,941 - Psyr_0657 0.15 +0.1 745,224 + Psyr_0657 0.38 +0.7 745,225 - Psyr_0657 0.38 +0.8 745,225 - Psyr_0657 0.38 +0.1 745,438 + Psyr_0657 0.56 +0.2 745,438 + Psyr_0657 0.56 +0.4 745,439 - Psyr_0657 0.56 -1.2 745,439 - Psyr_0657 0.56 -0.3 745,439 - Psyr_0657 0.56 +0.6 745,439 - Psyr_0657 0.56 -1.6 745,474 + Psyr_0657 0.59 +1.1 745,474 + Psyr_0657 0.59 +0.4 745,474 + Psyr_0657 0.59 +0.4 745,475 - Psyr_0657 0.59 +0.6 745,475 - Psyr_0657 0.59 +0.2 745,495 + Psyr_0657 0.61 +0.1 745,496 - Psyr_0657 0.61 -0.9 745,557 + Psyr_0657 0.66 +0.1 745,558 - Psyr_0657 0.66 +0.6 745,558 - Psyr_0657 0.66 -0.4 745,609 + Psyr_0657 0.70 -1.4 746,039 - +1.2 746,225 + Psyr_0658 0.20 +0.4 746,225 + Psyr_0658 0.20 +1.0 746,225 + Psyr_0658 0.20 +0.2 746,225 + Psyr_0658 0.20 +0.1 746,225 + Psyr_0658 0.20 -0.9 746,225 + Psyr_0658 0.20 -0.2 746,226 - Psyr_0658 0.20 -0.2 746,226 - Psyr_0658 0.20 +0.1 746,226 - Psyr_0658 0.20 +0.5 746,226 - Psyr_0658 0.20 -0.7 746,226 - Psyr_0658 0.20 +0.1 746,226 - Psyr_0658 0.20 -1.9 746,226 - Psyr_0658 0.20 +0.1 746,771 + Psyr_0658 0.74 -1.5 746,771 + Psyr_0658 0.74 +0.2 746,771 + Psyr_0658 0.74 -0.5 746,771 + Psyr_0658 0.74 +0.6 746,772 - Psyr_0658 0.74 -1.4 746,772 - Psyr_0658 0.74 -0.3 746,772 - Psyr_0658 0.74 +0.9 746,772 - Psyr_0658 0.74 +0.3 746,772 - Psyr_0658 0.74 +1.3 746,912 - Psyr_0658 0.88 -0.5
Or see this region's nucleotide sequence