Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0170

Experiment: KB with Huperzine A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Huperzine A 10 mM
184,403	+		Psyr_0169	0.51	-2.9
184,403	+		Psyr_0169	0.51	+0.9
184,403	+		Psyr_0169	0.51	-0.5
184,403	+		Psyr_0169	0.51	+1.3
184,404	-		Psyr_0169	0.51	+0.7
184,404	-		Psyr_0169	0.51	+0.4
184,404	-		Psyr_0169	0.51	-0.1
184,404	-		Psyr_0169	0.51	-0.2
184,751	+		Psyr_0169	0.90	-0.7
184,752	-				+0.0
184,842	+				+1.2
184,842	+				+1.0
184,842	+				-1.8
184,842	+				-0.4
184,842	+				-1.2
184,842	+				-0.8
184,842	+				+0.7
184,842	+				-0.2
184,842	+				-0.8
184,842	+				-0.4
184,842	+				-0.1
184,843	-				+0.8
184,843	-				+0.5
184,843	-				-1.1
184,843	-				-1.4
184,843	-				+0.5
184,843	-				+0.4
184,843	-				-0.6
184,843	-				-0.5
184,843	-				-0.6
184,843	-				+0.8
184,843	-				-2.4
184,843	-				+0.6
184,843	-				-0.1
184,843	-				-0.2
184,843	-				-0.0
184,843	-				-0.3
184,843	-				-0.4
184,843	-				+0.3
184,843	-				+0.3
184,843	-				+1.1
184,843	-				+0.5
184,843	-				-0.4
184,846	+				-0.9
184,846	+				-0.0
184,846	+				-0.2
184,847	-				-0.4
184,847	-				-0.6
184,847	-				+0.5
184,847	-				+0.6
184,855	+				-0.0
184,855	+				-0.8
184,856	-				-0.0
184,864	+				+1.6
184,865	-				+0.8
184,865	-				-0.9
184,865	-				+0.1
184,865	-				+0.6
184,947	+				-1.1
184,948	-				+0.2
184,948	-				+0.3
184,954	+				+0.3
184,954	+				-0.6
184,954	+				-0.4
184,954	+				-0.0
184,955	-				-0.2
184,955	-				+0.3
184,955	-				+0.2
184,955	-				-0.9
184,955	-				+1.6
185,169	-		Psyr_0170	0.37	-0.6
185,225	-		Psyr_0170	0.50	-0.7
185,385	+		Psyr_0170	0.89	-1.4
185,386	-		Psyr_0170	0.90	-0.5
185,445	-				-0.1
185,527	-				+0.9
185,554	+				-0.4
185,566	+				+0.7
185,682	+		Psyr_0171	0.11	-0.1
185,682	+		Psyr_0171	0.11	+0.6
185,682	+		Psyr_0171	0.11	-2.0
185,683	-		Psyr_0171	0.11	-0.9
185,921	+		Psyr_0171	0.42	-0.7
186,230	+		Psyr_0171	0.81	-0.2
186,230	+		Psyr_0171	0.81	-1.3
186,231	-		Psyr_0171	0.81	-0.3
186,231	-		Psyr_0171	0.81	+0.5
186,257	+		Psyr_0171	0.85	-0.2
186,257	+		Psyr_0171	0.85	-0.6
186,258	-		Psyr_0171	0.85	-0.2
186,258	-		Psyr_0171	0.85	+0.5
186,258	-		Psyr_0171	0.85	-0.4
186,258	-		Psyr_0171	0.85	-1.2
186,258	-		Psyr_0171	0.85	-1.0
186,258	-		Psyr_0171	0.85	+0.2
186,293	-		Psyr_0171	0.89	-0.8
186,309	+				-0.8
186,309	+				+0.6
186,309	+				-0.2
186,310	-				+1.2
186,310	-				-0.2
186,382	+				+0.6
186,382	+				+1.0
186,382	+				-0.9
186,383	-				-0.4
186,383	-				-0.4