Experiment: p-Coumaric (C) and Ammonium chloride (N); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS27450 and PFLU_RS27455 overlap by 26 nucleotides PFLU_RS27455 and PFLU_RS27460 overlap by 4 nucleotides PFLU_RS27460 and PFLU_RS27465 overlap by 4 nucleotides
PFLU_RS27450: PFLU_RS27450 - LPS-assembly protein LptD, at 6,104,705 to 6,107,515
_RS27450
PFLU_RS27455: PFLU_RS27455 - molecular chaperone SurA, at 6,107,490 to 6,108,830
_RS27455
PFLU_RS27460: PFLU_RS27460 - 4-hydroxythreonine-4-phosphate dehydrogenase PdxA, at 6,108,827 to 6,109,816
_RS27460
PFLU_RS27465: PFLU_RS27465 - 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA, at 6,109,813 to 6,110,625
_RS27465
Position (kb)
6107
6108
6109 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6107.454 kb on + strand at 6107.454 kb on + strand at 6109.810 kb on + strand at 6109.810 kb on + strand at 6109.810 kb on + strand at 6109.810 kb on + strand at 6109.810 kb on + strand at 6109.810 kb on + strand at 6109.810 kb on + strand at 6109.810 kb on + strand at 6109.811 kb on - strand at 6109.811 kb on - strand at 6109.811 kb on - strand at 6109.811 kb on - strand at 6109.811 kb on - strand at 6109.811 kb on - strand at 6109.811 kb on - strand at 6109.811 kb on - strand at 6109.811 kb on - strand at 6109.811 kb on - strand at 6109.811 kb on - strand at 6109.811 kb on - strand at 6109.811 kb on - strand at 6109.811 kb on - strand at 6109.811 kb on - strand at 6109.811 kb on - strand at 6109.812 kb on + strand at 6109.812 kb on + strand at 6109.812 kb on + strand at 6109.812 kb on + strand at 6109.812 kb on + strand at 6109.812 kb on + strand at 6109.812 kb on + strand at 6109.813 kb on - strand at 6109.813 kb on - strand at 6109.813 kb on - strand at 6109.813 kb on - strand at 6109.813 kb on - strand at 6109.813 kb on - strand at 6109.813 kb on - strand at 6109.825 kb on + strand at 6109.825 kb on + strand at 6109.825 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric (C) and Ammonium chloride (N); with MOPS remove 6,107,454 + -1.2 6,107,454 + -1.8 6,109,810 + -0.9 6,109,810 + +0.7 6,109,810 + +1.4 6,109,810 + -0.7 6,109,810 + +0.7 6,109,810 + +0.3 6,109,810 + -1.7 6,109,810 + -0.0 6,109,811 - +0.4 6,109,811 - -1.5 6,109,811 - -0.6 6,109,811 - +0.1 6,109,811 - -0.3 6,109,811 - +2.0 6,109,811 - +0.9 6,109,811 - +0.5 6,109,811 - +0.3 6,109,811 - +1.2 6,109,811 - +0.2 6,109,811 - +0.6 6,109,811 - +0.4 6,109,811 - +0.9 6,109,811 - -0.2 6,109,811 - +0.6 6,109,812 + -0.1 6,109,812 + +0.7 6,109,812 + +0.1 6,109,812 + +0.3 6,109,812 + +0.5 6,109,812 + -0.1 6,109,812 + -2.4 6,109,813 - -0.5 6,109,813 - -1.5 6,109,813 - -1.4 6,109,813 - -0.5 6,109,813 - +1.1 6,109,813 - -0.3 6,109,813 - -1.9 6,109,825 + +0.3 6,109,825 + +0.7 6,109,825 + +0.5
Or see this region's nucleotide sequence