Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS26240

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntBWI76_RS26235 and BWI76_RS26240 overlap by 1 nucleotidesBWI76_RS26240 and BWI76_RS26245 are separated by 180 nucleotides BWI76_RS26235: BWI76_RS26235 - gluconate transporter, at 5,431,582 to 5,432,922 _RS26235 BWI76_RS26240: BWI76_RS26240 - gluconokinase, at 5,432,922 to 5,433,452 _RS26240 BWI76_RS26245: BWI76_RS26245 - transcriptional regulator, at 5,433,633 to 5,434,628 _RS26245 Position (kb) 5432 5433 5434Strain fitness (log2 ratio) -2 -1 0 1at 5432.091 kb on - strand, within BWI76_RS26235at 5432.294 kb on + strand, within BWI76_RS26235at 5432.953 kb on - strandat 5433.773 kb on - strand, within BWI76_RS26245at 5433.900 kb on - strand, within BWI76_RS26245at 5434.022 kb on + strand, within BWI76_RS26245at 5434.203 kb on - strand, within BWI76_RS26245at 5434.220 kb on + strand, within BWI76_RS26245

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C)
remove
5,432,091 - BWI76_RS26235 0.38 +0.3
5,432,294 + BWI76_RS26235 0.53 -0.9
5,432,953 - +1.6
5,433,773 - BWI76_RS26245 0.14 -0.4
5,433,900 - BWI76_RS26245 0.27 -0.1
5,434,022 + BWI76_RS26245 0.39 -2.3
5,434,203 - BWI76_RS26245 0.57 -0.6
5,434,220 + BWI76_RS26245 0.59 -0.2

Or see this region's nucleotide sequence