Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24620 and BWI76_RS24625 are separated by 113 nucleotides BWI76_RS24625 and BWI76_RS24630 overlap by 92 nucleotides BWI76_RS24630 and BWI76_RS24635 are separated by 74 nucleotides BWI76_RS24635 and BWI76_RS24640 overlap by 4 nucleotides
BWI76_RS24620: BWI76_RS24620 - PadR family transcriptional regulator, at 5,132,558 to 5,133,112
_RS24620
BWI76_RS24625: BWI76_RS24625 - hypothetical protein, at 5,133,226 to 5,133,417
_RS24625
BWI76_RS24630: BWI76_RS24630 - putrescine aminotransferase, at 5,133,326 to 5,134,732
_RS24630
BWI76_RS24635: BWI76_RS24635 - autoinducer-2 (AI-2) modifying protein LsrG, at 5,134,807 to 5,135,103
_RS24635
BWI76_RS24640: BWI76_RS24640 - aldolase, at 5,135,100 to 5,135,987
_RS24640
Position (kb) 5133
5134
5135 Strain fitness (log2 ratio) -2
-1
0
1 at 5132.588 kb on - strand at 5132.764 kb on - strand at 5132.940 kb on + strand, within BWI76_RS24620 at 5132.960 kb on - strand, within BWI76_RS24620 at 5132.960 kb on - strand, within BWI76_RS24620 at 5132.960 kb on - strand, within BWI76_RS24620 at 5132.977 kb on + strand, within BWI76_RS24620 at 5133.122 kb on - strand at 5133.188 kb on - strand at 5133.282 kb on + strand, within BWI76_RS24625 at 5133.309 kb on + strand, within BWI76_RS24625 at 5133.317 kb on - strand, within BWI76_RS24625 at 5133.338 kb on + strand at 5133.360 kb on + strand at 5133.367 kb on - strand at 5133.646 kb on + strand, within BWI76_RS24630 at 5133.914 kb on + strand, within BWI76_RS24630 at 5134.078 kb on - strand, within BWI76_RS24630 at 5134.153 kb on + strand, within BWI76_RS24630 at 5134.369 kb on - strand, within BWI76_RS24630 at 5134.415 kb on - strand, within BWI76_RS24630 at 5134.482 kb on + strand, within BWI76_RS24630 at 5134.561 kb on - strand, within BWI76_RS24630 at 5134.786 kb on + strand at 5134.804 kb on + strand at 5134.804 kb on + strand at 5134.812 kb on - strand at 5134.812 kb on - strand at 5134.875 kb on + strand, within BWI76_RS24635 at 5134.909 kb on - strand, within BWI76_RS24635 at 5135.021 kb on + strand, within BWI76_RS24635 at 5135.041 kb on - strand, within BWI76_RS24635 at 5135.136 kb on - strand at 5135.285 kb on - strand, within BWI76_RS24640 at 5135.330 kb on - strand, within BWI76_RS24640 at 5135.490 kb on - strand, within BWI76_RS24640 at 5135.496 kb on - strand, within BWI76_RS24640 at 5135.557 kb on + strand, within BWI76_RS24640 at 5135.565 kb on - strand, within BWI76_RS24640 at 5135.722 kb on - strand, within BWI76_RS24640
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 5,132,588 - -1.1 5,132,764 - -0.1 5,132,940 + BWI76_RS24620 0.69 +0.5 5,132,960 - BWI76_RS24620 0.72 -0.4 5,132,960 - BWI76_RS24620 0.72 +0.1 5,132,960 - BWI76_RS24620 0.72 +0.1 5,132,977 + BWI76_RS24620 0.75 -0.4 5,133,122 - -0.4 5,133,188 - +0.6 5,133,282 + BWI76_RS24625 0.29 -0.1 5,133,309 + BWI76_RS24625 0.43 +1.4 5,133,317 - BWI76_RS24625 0.47 -0.1 5,133,338 + -0.0 5,133,360 + -0.7 5,133,367 - +0.2 5,133,646 + BWI76_RS24630 0.23 -0.0 5,133,914 + BWI76_RS24630 0.42 +0.5 5,134,078 - BWI76_RS24630 0.53 +0.2 5,134,153 + BWI76_RS24630 0.59 -1.9 5,134,369 - BWI76_RS24630 0.74 -0.0 5,134,415 - BWI76_RS24630 0.77 +0.2 5,134,482 + BWI76_RS24630 0.82 +0.3 5,134,561 - BWI76_RS24630 0.88 -0.4 5,134,786 + -0.4 5,134,804 + +0.1 5,134,804 + +0.2 5,134,812 - -0.2 5,134,812 - +0.9 5,134,875 + BWI76_RS24635 0.23 +0.6 5,134,909 - BWI76_RS24635 0.34 -1.1 5,135,021 + BWI76_RS24635 0.72 -0.6 5,135,041 - BWI76_RS24635 0.79 -0.7 5,135,136 - -0.1 5,135,285 - BWI76_RS24640 0.21 +0.2 5,135,330 - BWI76_RS24640 0.26 -0.1 5,135,490 - BWI76_RS24640 0.44 +0.4 5,135,496 - BWI76_RS24640 0.45 -0.8 5,135,557 + BWI76_RS24640 0.51 -1.1 5,135,565 - BWI76_RS24640 0.52 -0.2 5,135,722 - BWI76_RS24640 0.70 -0.2
Or see this region's nucleotide sequence