Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24170 and BWI76_RS24175 are separated by 67 nucleotides BWI76_RS24175 and BWI76_RS24180 are separated by 70 nucleotides BWI76_RS24180 and BWI76_RS24185 are separated by 168 nucleotides
BWI76_RS24170: BWI76_RS24170 - nucleoside permease, at 5,038,628 to 5,039,884
_RS24170
BWI76_RS24175: BWI76_RS24175 - ornithine decarboxylase, at 5,039,952 to 5,042,090
_RS24175
BWI76_RS24180: BWI76_RS24180 - hypothetical protein, at 5,042,161 to 5,042,359
_RS24180
BWI76_RS24185: BWI76_RS24185 - membrane protein, at 5,042,528 to 5,043,244
_RS24185
Position (kb)
5039
5040
5041
5042
5043 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5038.963 kb on + strand, within BWI76_RS24170 at 5038.971 kb on - strand, within BWI76_RS24170 at 5039.060 kb on - strand, within BWI76_RS24170 at 5039.110 kb on + strand, within BWI76_RS24170 at 5039.133 kb on + strand, within BWI76_RS24170 at 5039.139 kb on - strand, within BWI76_RS24170 at 5039.141 kb on - strand, within BWI76_RS24170 at 5039.141 kb on - strand, within BWI76_RS24170 at 5039.154 kb on + strand, within BWI76_RS24170 at 5039.162 kb on - strand, within BWI76_RS24170 at 5039.162 kb on - strand, within BWI76_RS24170 at 5039.490 kb on - strand, within BWI76_RS24170 at 5039.566 kb on + strand, within BWI76_RS24170 at 5039.576 kb on + strand at 5039.830 kb on + strand at 5039.838 kb on - strand at 5039.865 kb on - strand at 5039.970 kb on + strand at 5039.970 kb on + strand at 5039.981 kb on + strand at 5040.016 kb on + strand at 5040.301 kb on - strand, within BWI76_RS24175 at 5040.313 kb on - strand, within BWI76_RS24175 at 5040.675 kb on - strand, within BWI76_RS24175 at 5040.676 kb on - strand, within BWI76_RS24175 at 5040.703 kb on - strand, within BWI76_RS24175 at 5040.857 kb on + strand, within BWI76_RS24175 at 5041.172 kb on + strand, within BWI76_RS24175 at 5041.187 kb on - strand, within BWI76_RS24175 at 5041.208 kb on + strand, within BWI76_RS24175 at 5041.216 kb on + strand, within BWI76_RS24175 at 5041.398 kb on - strand, within BWI76_RS24175 at 5041.411 kb on + strand, within BWI76_RS24175 at 5041.580 kb on - strand, within BWI76_RS24175 at 5041.638 kb on - strand, within BWI76_RS24175 at 5041.690 kb on + strand, within BWI76_RS24175 at 5041.839 kb on + strand, within BWI76_RS24175 at 5041.920 kb on + strand at 5042.011 kb on - strand at 5042.013 kb on + strand at 5042.013 kb on + strand at 5042.013 kb on + strand at 5042.021 kb on - strand at 5042.021 kb on - strand at 5042.036 kb on + strand at 5042.057 kb on - strand at 5042.138 kb on + strand at 5042.141 kb on + strand at 5042.160 kb on + strand at 5042.249 kb on + strand, within BWI76_RS24180 at 5042.257 kb on - strand, within BWI76_RS24180 at 5042.372 kb on + strand at 5042.407 kb on + strand at 5042.407 kb on + strand at 5042.528 kb on + strand at 5042.692 kb on + strand, within BWI76_RS24185 at 5042.722 kb on - strand, within BWI76_RS24185 at 5042.773 kb on + strand, within BWI76_RS24185 at 5042.781 kb on - strand, within BWI76_RS24185 at 5042.843 kb on + strand, within BWI76_RS24185 at 5042.999 kb on - strand, within BWI76_RS24185
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 5,038,963 + BWI76_RS24170 0.27 -0.3 5,038,971 - BWI76_RS24170 0.27 -2.0 5,039,060 - BWI76_RS24170 0.34 -0.8 5,039,110 + BWI76_RS24170 0.38 -1.2 5,039,133 + BWI76_RS24170 0.40 -1.2 5,039,139 - BWI76_RS24170 0.41 -0.7 5,039,141 - BWI76_RS24170 0.41 -0.9 5,039,141 - BWI76_RS24170 0.41 -0.9 5,039,154 + BWI76_RS24170 0.42 -0.5 5,039,162 - BWI76_RS24170 0.42 -1.0 5,039,162 - BWI76_RS24170 0.42 -0.3 5,039,490 - BWI76_RS24170 0.69 +0.6 5,039,566 + BWI76_RS24170 0.75 -0.6 5,039,576 + +0.9 5,039,830 + -0.2 5,039,838 - -2.3 5,039,865 - -0.2 5,039,970 + +0.1 5,039,970 + -0.3 5,039,981 + +0.3 5,040,016 + -0.2 5,040,301 - BWI76_RS24175 0.16 +0.2 5,040,313 - BWI76_RS24175 0.17 -0.9 5,040,675 - BWI76_RS24175 0.34 -0.1 5,040,676 - BWI76_RS24175 0.34 +0.4 5,040,703 - BWI76_RS24175 0.35 -0.0 5,040,857 + BWI76_RS24175 0.42 -0.1 5,041,172 + BWI76_RS24175 0.57 +0.4 5,041,187 - BWI76_RS24175 0.58 -1.2 5,041,208 + BWI76_RS24175 0.59 +0.2 5,041,216 + BWI76_RS24175 0.59 +0.5 5,041,398 - BWI76_RS24175 0.68 +0.4 5,041,411 + BWI76_RS24175 0.68 +1.9 5,041,580 - BWI76_RS24175 0.76 +0.9 5,041,638 - BWI76_RS24175 0.79 -0.5 5,041,690 + BWI76_RS24175 0.81 -0.4 5,041,839 + BWI76_RS24175 0.88 +0.8 5,041,920 + +1.5 5,042,011 - -0.3 5,042,013 + +0.3 5,042,013 + -0.3 5,042,013 + -0.0 5,042,021 - +0.3 5,042,021 - +0.5 5,042,036 + +0.3 5,042,057 - +0.1 5,042,138 + +0.1 5,042,141 + +0.5 5,042,160 + -0.0 5,042,249 + BWI76_RS24180 0.44 -0.2 5,042,257 - BWI76_RS24180 0.48 -0.6 5,042,372 + +0.9 5,042,407 + +1.3 5,042,407 + -0.8 5,042,528 + +0.2 5,042,692 + BWI76_RS24185 0.23 -0.4 5,042,722 - BWI76_RS24185 0.27 +1.5 5,042,773 + BWI76_RS24185 0.34 -0.2 5,042,781 - BWI76_RS24185 0.35 +0.2 5,042,843 + BWI76_RS24185 0.44 -1.1 5,042,999 - BWI76_RS24185 0.66 -0.2
Or see this region's nucleotide sequence