Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22300 and BWI76_RS22305 overlap by 8 nucleotides BWI76_RS22305 and BWI76_RS22310 overlap by 4 nucleotides BWI76_RS22310 and BWI76_RS22315 overlap by 1 nucleotides BWI76_RS22315 and BWI76_RS22320 are separated by 9 nucleotides
BWI76_RS22300: BWI76_RS22300 - hydrogenase 3 maturation endopeptidase HyCI, at 4,649,947 to 4,650,432
_RS22300
BWI76_RS22305: BWI76_RS22305 - formate hydrogenlyase maturation protein HycH, at 4,650,425 to 4,650,835
_RS22305
BWI76_RS22310: BWI76_RS22310 - hydrogenase 3 small subunit, at 4,650,832 to 4,651,599
_RS22310
BWI76_RS22315: BWI76_RS22315 - formate hydrogenlyase complex iron-sulfur subunit, at 4,651,599 to 4,652,141
_RS22315
BWI76_RS22320: BWI76_RS22320 - hydrogenase 3 large subunit, at 4,652,151 to 4,653,860
_RS22320
Position (kb) 4650
4651
4652 Strain fitness (log2 ratio) -2
-1
0
1 at 4649.995 kb on + strand at 4650.366 kb on - strand, within BWI76_RS22300 at 4650.494 kb on - strand, within BWI76_RS22305 at 4650.990 kb on + strand, within BWI76_RS22310 at 4651.316 kb on + strand, within BWI76_RS22310 at 4651.334 kb on - strand, within BWI76_RS22310 at 4651.414 kb on - strand, within BWI76_RS22310 at 4651.414 kb on - strand, within BWI76_RS22310 at 4651.518 kb on + strand, within BWI76_RS22310 at 4651.620 kb on - strand at 4651.646 kb on + strand at 4651.656 kb on + strand, within BWI76_RS22315 at 4651.664 kb on - strand, within BWI76_RS22315 at 4651.664 kb on - strand, within BWI76_RS22315 at 4652.005 kb on - strand, within BWI76_RS22315 at 4652.078 kb on + strand, within BWI76_RS22315 at 4652.102 kb on - strand at 4652.190 kb on + strand at 4652.212 kb on + strand at 4652.234 kb on + strand at 4652.257 kb on + strand at 4652.257 kb on + strand at 4652.265 kb on - strand at 4652.281 kb on - strand at 4652.309 kb on + strand at 4652.392 kb on - strand, within BWI76_RS22320 at 4652.465 kb on + strand, within BWI76_RS22320 at 4652.472 kb on + strand, within BWI76_RS22320 at 4652.473 kb on - strand, within BWI76_RS22320 at 4652.542 kb on + strand, within BWI76_RS22320 at 4652.550 kb on - strand, within BWI76_RS22320 at 4652.550 kb on - strand, within BWI76_RS22320 at 4652.597 kb on - strand, within BWI76_RS22320
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 4,649,995 + +0.1 4,650,366 - BWI76_RS22300 0.86 -0.3 4,650,494 - BWI76_RS22305 0.17 +0.7 4,650,990 + BWI76_RS22310 0.21 -0.2 4,651,316 + BWI76_RS22310 0.63 -0.8 4,651,334 - BWI76_RS22310 0.65 -0.0 4,651,414 - BWI76_RS22310 0.76 +0.5 4,651,414 - BWI76_RS22310 0.76 +0.2 4,651,518 + BWI76_RS22310 0.89 -0.8 4,651,620 - -0.6 4,651,646 + -0.2 4,651,656 + BWI76_RS22315 0.10 -0.5 4,651,664 - BWI76_RS22315 0.12 +0.1 4,651,664 - BWI76_RS22315 0.12 -0.9 4,652,005 - BWI76_RS22315 0.75 -0.5 4,652,078 + BWI76_RS22315 0.88 +0.3 4,652,102 - -0.1 4,652,190 + +1.4 4,652,212 + +0.2 4,652,234 + -0.3 4,652,257 + -1.9 4,652,257 + +0.2 4,652,265 - +0.4 4,652,281 - +0.3 4,652,309 + +0.2 4,652,392 - BWI76_RS22320 0.14 +0.1 4,652,465 + BWI76_RS22320 0.18 -1.3 4,652,472 + BWI76_RS22320 0.19 -0.2 4,652,473 - BWI76_RS22320 0.19 -0.8 4,652,542 + BWI76_RS22320 0.23 -0.2 4,652,550 - BWI76_RS22320 0.23 +0.0 4,652,550 - BWI76_RS22320 0.23 +0.6 4,652,597 - BWI76_RS22320 0.26 +0.0
Or see this region's nucleotide sequence